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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-GVc
(Reference Set)
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Correspondences
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Maps 25
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 25
Map Start: 0 cM
Map Stop: 155.5 cM
Features by Type:
60 Marker
11 QTL
71 Total

Map Features

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Items 1 to 25 of 71.       of 3 | Next
Cotton - GVc - 25
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
QTLClust_COL_25_1 QTL 108.3 - 110.8 No other positions
QTLClust_FIN_25_2 QTL 106.8 - 108.4 No other positions
QTLClust_FIN_25_5 QTL 66 - 67.2 No other positions
QTLClust_FIN_25_3 QTL 93.4 - 97.9 No other positions
QTLClust_FIN_25_1 QTL 121.9 - 130.6 No other positions
QTLClust_COL_25_4 QTL 74.7 - 76.7 No other positions
QTLClust_COL_25_6 QTL 66.1 - 67.1 No other positions
QTLClust_COL_25_3 QTL 88.4 - 90.4 No other positions
QTLClust_COL_25_5 QTL 69.9 - 72.4 No other positions
QTLClust_COL_25_2 QTL 97.5 - 100.2 No other positions
QTLClust_FIN_25_4 QTL 82.9 - 86.7 No other positions
E3M5_400 Marker 90 Cotton - Guazuncho2xVH8-BC1 - c25 E3M5_400 Marker 100.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 E3M5_400 Marker 65.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 E3M5_400 Marker 70.2 (cM) Automated name-based View Maps
E31M55-M58.1 Marker 91 Cotton - Guazuncho2xVH8-RIL - c25 E31M55-M58.1 Marker 47.42 (cM) Automated name-based View Maps
Cotton - HDC - 25 E31M55-M58.1 Marker 64.3 (cM) Automated name-based View Maps
BNL1417 Marker 91.1 Cotton - HDC - 25 BNL1417 Marker 64.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1417 Marker Cotton 49,863,051 - 49,863,290 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1417 Marker 44.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1417 Marker 87.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1417 Marker 114.9 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1417 Marker 93 (cM) Automated name-based View Maps
Cotton - T3 - 25 BNL1417 Marker 46.74 (cM) Automated name-based View Maps
E2M5_420 Marker 94 Cotton - HDC - 25 E2M5_420 Marker 61.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 E2M5_420 Marker 70.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 E2M5_420 Marker 101.9 (cM) Automated name-based View Maps
NAU1277 Marker 97.9 Cotton - CH - 6 NAU1277 Marker 95.8 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU1277 Marker 53.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU1277 Marker 83.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 NAU1277 Marker 53.37 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU1277 Marker 57.6 (cM) Automated name-based View Maps
CIR338 Marker 100.2 Cotton - HDC - 25 CIR338 Marker 55.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 CIR338 Marker 67 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 CIR338b Marker 31.62 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 CIR338 Marker 128.4 (cM) Automated name-based View Maps
Cotton - GVc - 13 CIR338 Marker 83.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 CIR338 Marker 51.58 (cM) Automated name-based View Maps
pAR364 Marker 106.4 Cotton - PK - c25 pAR364 Marker 112.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 pAR364 Marker 132.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pAR364 Marker Cotton 55,899,384 - 55,900,467 (bp) Automated name-based View Maps
Cotton - HDC - 25 pAR364 Marker 49.1 (cM) Automated name-based View Maps
G1099 Marker 115.7 Cotton - Guazuncho2xVH8-BC1 - c25 G1099 Marker 141.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 G1099 Marker 216.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 G1099 Marker 46.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 G1099 Marker 39.8 (cM) Automated name-based View Maps
Cotton - PK - c6 G1099 Marker 80.3 (cM) Automated name-based View Maps
Cotton - GVc - 6 G1099 Marker 102.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 G1099 Marker Cotton 57,458,624 - 57,459,719 (bp) Automated name-based View Maps
Cotton - PK - c25 G1099 Marker 116.2 (cM) Automated name-based View Maps
pAR648 Marker 116.7 Cotton - HDC - 11 pAR648 Marker 197.5 (cM) Automated name-based View Maps
Cotton - GVc - 11 pAR648 Marker 22.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 pAR648 Marker 22.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 pAR648 Marker 141.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 pAR648 Marker 38.8 (cM) Automated name-based View Maps
E5M8_230 Marker 124.9 Cotton - HDC - 25 E5M8_230 Marker 30.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 E5M8_230 Marker 150 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 E5M8_230 Marker 107.1 (cM) Automated name-based View Maps
A1214 Marker 148.9 Cotton - HDC - 21 A1214 Marker 42 (cM) Automated name-based View Maps
Cotton - PK - D02 A1214 Marker 191.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 A1214 Marker 6.6 (cM) Automated name-based View Maps
Cotton - PK - A03 A1214 Marker 198 (cM) Automated name-based View Maps
Cotton - HDC - 11 A1214 Marker 21.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 A1214 Marker 177.7 (cM) Automated name-based View Maps
Cotton - GVc - 20 A1214 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 A1214 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 4 A1214 Marker 50.7 (cM) Automated name-based View Maps
Cotton - PK - c4 A1214 Marker 142.3 (cM) Automated name-based View Maps
Cotton - PK - c25 A1214 Marker 159.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 A1214 Marker Cotton 121,016 - 121,546 (bp) Automated name-based View Maps
Cotton - HDC - 20 A1214 Marker 168.1 (cM) Automated name-based View Maps
E3M2_222 Marker 155.5 Cotton - HDC - 25 E3M2_222 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 E3M2_222 Marker 183.4 (cM) Automated name-based View Maps
E4M3_268 Marker 0 Cotton - Guazuncho2xVH8-BC1 - c25 E4M3_268 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 E4M3_268 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 25 E4M3_268 Marker 149.4 (cM) Automated name-based View Maps
pAR366 Marker 6.6 Cotton - HDC - 25 pAR366 Marker 142.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 pAR366 Marker 15.4 (cM) Automated name-based View Maps
Cotton - PK - c25 pAR366 Marker 12.6 (cM) Automated name-based View Maps