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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-GVc
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - GVc [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 113 cM
Features by Type:
65 Marker
65 Total

Map Features

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Items 1 to 25 of 65.       of 3 | Next
Cotton - GVc - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E6M8_320 Marker 30.1 Cotton - Guazuncho2xVH8-BC1 - c7 E6M8_320 Marker 70.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 E6M8_320 Marker 60.9 (cM) Automated name-based View Maps
pAR606 Marker 30.1 Cotton - HDC - 7 pAR606 Marker 60.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR606 Marker 70.2 (cM) Automated name-based View Maps
E1M1_161 Marker 30.1 Cotton - Guazuncho2xVH8-BC1 - c7 E1M1_161 Marker 70.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 E1M1_161 Marker 60.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 E1M1_161 Marker 10.6 (cM) Automated name-based View Maps
pAR024 Marker 30.1 Cotton - Guazuncho2xVH8-BC1 - c7 pAR024 Marker 70.2 (cM) Automated name-based View Maps
Cotton - PK - c7 pAR024 Marker 118.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR024 Marker 108.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR024 Marker 60.9 (cM) Automated name-based View Maps
Cotton - PK - D02 pAR024 Marker 98.5 (cM) Automated name-based View Maps
Cotton - PK - A03 pAR024 Marker 104.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 pAR024 Marker 111.1 (cM) Automated name-based View Maps
E4M3_320 Marker 30.6 Cotton - HDC - 7 E4M3_320 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 E4M3_320 Marker 10.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 E4M3_320 Marker 70.2 (cM) Automated name-based View Maps
E8M6_400 Marker 31.2 Cotton - HDC - 7 E8M6_400 Marker 61.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 E8M6_400 Marker 82.1 (cM) Automated name-based View Maps
E3M7_270 Marker 31.8 Cotton - HDC - 7 E3M7_270 Marker 62 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 E3M7_270 Marker 70.2 (cM) Automated name-based View Maps
E5M8_206 Marker 32.6 Cotton - HDC - 7 E5M8_206 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 E5M8_206 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 E5M8_206 Marker 10.6 (cM) Automated name-based View Maps
E1M3_128 Marker 33.4 Cotton - Guazuncho2xVH8-BC2 - c7 E1M3_128 Marker 11.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 E1M3_128 Marker 63.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 E1M3_128 Marker 79.5 (cM) Automated name-based View Maps
E5M4_86 Marker 34.6 Cotton - Guazuncho2xVH8-BC1 - c7 E5M4_86 Marker 69.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 E5M4_86 Marker 64.3 (cM) Automated name-based View Maps
CIR141 Marker 36.4 Cotton - HDC - 7 CIR141 Marker 65.9 (cM) Automated name-based View Maps
Cotton - TH - 7 CIR141 Marker 63 (cM) Automated name-based View Maps
Cotton - T3 - 7 CIR141 Marker 88.09 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CIR141 Marker 86.8 (cM) Automated name-based View Maps
Cotton - E3 - 7 CIR141 Marker 75.1 (cM) Automated name-based View Maps
BNL1694 Marker 36.4 Cotton - TH - 7 BNL1694 Marker 69.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1694 Marker 52.4 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1694 Marker 85.88 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL1694 Marker 58.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 64.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 67.8 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 94.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 BNL1694 Marker 86.8 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 16 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1694 Marker 75.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1694 Marker 78.22 (cM) Automated name-based View Maps
E5M6_160 Marker 37.3 Cotton - Guazuncho2xVH8-BC1 - c7 E5M6_160 Marker 86.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 E5M6_160 Marker 18.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 E5M6_160 Marker 67.1 (cM) Automated name-based View Maps
JESPR228 Marker 37.5 Cotton - Graimondii_physical - Gr_Chr01 JESPR228 Marker Cotton 24,530,390 - 24,530,827 (bp) Automated name-based View Maps
Cotton - T3 - 16 JESPR228 Marker 76.37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR228 Marker 86.8 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR228 Marker 58.1 (cM) Automated name-based View Maps
Cotton - HDC - 16 JESPR228 Marker 54.6 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR228 Marker 57.5 (cM) Automated name-based View Maps
Cotton - T3 - 7 JESPR228 Marker 86.06 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR228 Marker 100.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR228b Marker 19.88 (cM) Automated name-based View Maps
Cotton - HDC - 7 JESPR228 Marker 67.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 JESPR228a Marker 21.24 (cM) Automated name-based View Maps
E2M4_209 Marker 38.9 Cotton - Guazuncho2xVH8-BC1 - c7 E2M4_209 Marker 79.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 E2M4_209 Marker 68.8 (cM) Automated name-based View Maps
E43M2-M271.3 Marker 39.5 Cotton - HDC - 7 E43M2-M271.3 Marker 69.3 (cM) Automated name-based View Maps
E5M6_76 Marker 40.3 Cotton - Guazuncho2xVH8-BC1 - c7 E5M6_76 Marker 59.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 E5M6_76 Marker 70 (cM) Automated name-based View Maps
CIR323 Marker 40.5 Cotton - Guazuncho2xVH8-RIL - c7 CIR323 Marker 24.48 (cM) Automated name-based View Maps
Cotton - HDC - 7 CIR323 Marker 70.1 (cM) Automated name-based View Maps
E1M2-M121.0 Marker 41.1 Cotton - HDC - 7 E1M2-M121.0 Marker 70.6 (cM) Automated name-based View Maps
pAR402 Marker 41.7 Cotton - Graimondii_physical - Gr_Chr01 pAR402 Marker Cotton 22,395,363 - 22,395,503 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 pAR402 Marker 92.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 pAR402 Marker 71 (cM) Automated name-based View Maps
Cotton - HDC - 16 pAR402 Marker 52.4 (cM) Automated name-based View Maps
Cotton - PK - c16 pAR402 Marker 58.1 (cM) Automated name-based View Maps
E43M3-M302.0 Marker 42 Cotton - HDC - 7 E43M3-M302.0 Marker 71.2 (cM) Automated name-based View Maps
E3M4-M174.9 Marker 42.1 Cotton - HDC - 7 E3M4-M174.9 Marker 71.2 (cM) Automated name-based View Maps
CG23 Marker 43.4 Cotton - GVc - 3 CG23 Marker 21.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 CG23 Marker 72.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 CG23 Marker 85.1 (cM) Automated name-based View Maps
Cotton - GVc - 11 CG23 Marker 227.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 CG23 Marker 235 (cM) Automated name-based View Maps
Cotton - HDC - 3 CG23 Marker 90 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CG23 Marker 27.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 CG23 Marker 18.1 (cM) Automated name-based View Maps
E43M52-M-553.6 Marker 43.6 Cotton - Guazuncho2xVH8-RIL - c7 E43M52-M-553.6 Marker 19.51 (cM) Automated name-based View Maps
Cotton - HDC - 7 E43M52-M-553.6 Marker 72.4 (cM) Automated name-based View Maps
E31M2-M461.9 Marker 44.7 Cotton - HDC - 7 E31M2-M461.9 Marker 73.4 (cM) Automated name-based View Maps