CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A02
Map Start: 0 cM
Map Stop: 177.6 cM
Features by Type:
102 Marker
16 QTL
118 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 118.       of 5 | Next
Cotton - PK - A02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig22C03 Marker 86.5 Cotton - HDC - 8 Unig22C03 Marker 100.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig22C03 Marker Cotton 39,219,981 - 39,220,619 (bp) Automated name-based View Maps
Unig24D03 Marker 68.4 Cotton - HDC - 8 Unig24D03 Marker 87.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig24D03 Marker Cotton 47,606,125 - 47,606,770 (bp) Automated name-based View Maps
Unig25C01 Marker 112.3 Cotton - Graimondii_physical - Gr_Chr04 Unig25C01 Marker Cotton 5,432,334 - 5,433,003 (bp) Automated name-based View Maps
Cotton - HDC - 8 Unig25C01 Marker 124.3 (cM) Automated name-based View Maps
Unig27F12 Marker 97.1 Cotton - HDC - 8 Unig27F12 Marker 103.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig27F12 Marker Cotton 7,812,036 - 7,812,688 (bp) Automated name-based View Maps
W11 Marker 46.7 Cotton - HDC - 8 W11 Marker 46.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 W11 Marker 95.2 (cM) Automated name-based View Maps
Cotton - PK - A01 W11 Marker 56.9 (cM) Automated name-based View Maps
A1216 Marker 29.8 Cotton - HDC - 8 A1216 Marker 30.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 A1216 Marker Cotton 60,127,079 - 60,128,642 (bp) Automated name-based View Maps
A1401 Marker 99.1 Cotton - HDC - 8 A1401 Marker 103.8 (cM) Automated name-based View Maps
A1590 Marker 99.1 Cotton - HDC - 8 A1590 Marker 103.8 (cM) Automated name-based View Maps
Cotton - PK - D03 A1590 Marker 120.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 A1590 Marker 110.9 (cM) Automated name-based View Maps
A1679 Marker 41.3 Cotton - HDC - 8 A1679 Marker 38.4 (cM) Automated name-based View Maps
Cotton - GVc - 8 A1679 Marker 32.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 A1679 Marker 56.4 (cM) Automated name-based View Maps
A1698 Marker 25.2 Cotton - HDC - 8 A1698 Marker 27.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 A1698 Marker Cotton 60,281,844 - 60,282,339 (bp) Automated name-based View Maps
A1731 Marker 41.3 Cotton - Graimondii_physical - Gr_Chr04 A1731 Marker Cotton 58,249,523 - 58,250,065 (bp) Automated name-based View Maps
Cotton - HDC - 8 A1731 Marker 38.4 (cM) Automated name-based View Maps
A1828 Marker 91.9 Cotton - HDC - 8 A1828 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 A1828 Marker Cotton 33,572,392 - 33,573,682 (bp) Automated name-based View Maps
BNL3257 Marker 99.6 Cotton - TH - 8 BNL3257 Marker 71.4 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3257 Marker 56.08 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3257 Marker 103.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3257 Marker 170.6 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3257 Marker 119.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3257 Marker Cotton 27,349,887 - 27,350,563 (bp) Automated name-based View Maps
Cotton - CH - 8 BNL3257 Marker 126.8 (cM) Automated name-based View Maps
BNL3627 Marker 128.3 Cotton - HDC - 24 BNL3627 Marker 130.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3627 Marker 41 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL3627 Marker 120.1 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3627 Marker 109.7 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL3627 Marker 15.3 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3627 Marker 99.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL3627c Marker 36.06 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3627 Marker 37.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D03 BNL3627 Marker 66.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3627a Marker 82.32 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3627 Marker 85.3 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3627 Marker 36.72 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3627 Marker 78.3 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL3627 Marker 148.9 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3627 Marker 145.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3627 Marker 136.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3627 Marker Cotton 4,069,298 - 4,069,687 (bp) Automated name-based View Maps
Coau1M19 Marker 6.7 Cotton - HDC - 24 Coau1M19 Marker 19.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau1M19 Marker 13.9 (cM) Automated name-based View Maps
Cotton - PK - D03 Coau1M19 Marker 4.8 (cM) Automated name-based View Maps
Coau1O15 Marker 68.4 Cotton - HDC - 2 Coau1O15 Marker 55.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau1O15 Marker 73.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Coau1O15 Marker Cotton 43,232,547 - 43,233,094 (bp) Automated name-based View Maps
Cotton - PK - c2 Coau1O15 Marker 96.6 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau1O15 Marker 87.8 (cM) Automated name-based View Maps
Coau2A22 Marker 124.8 Cotton - HDC - 13 Coau2A22 Marker 58.1 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau2A22 Marker 128.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Coau2A22 Marker Cotton 53,620,653 - 53,621,538 (bp) Automated name-based View Maps
Cotton - PK - A01 Coau2A22 Marker 100.9 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau2A22 Marker 49.9 (cM) Automated name-based View Maps
Coau2L09 Marker 0 Cotton - HDC - 24 Coau2L09 Marker 16.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Coau2L09 Marker Cotton 61,892,422 - 61,893,085 (bp) Automated name-based View Maps
Cotton - PK - D03 Coau2L09 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 8 Coau2L09 Marker 8.3 (cM) Automated name-based View Maps
G1078 Marker 160.6 Cotton - HDC - 8 G1078 Marker 140.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 G1078 Marker Cotton 15,707,060 - 15,707,256 (bp) Automated name-based View Maps
G1114 Marker 6.7 Cotton - Guazuncho2xVH8-BC1 - A02 G1114 Marker 19.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 G1114 Marker Cotton 62,096,385 - 62,096,953 (bp) Automated name-based View Maps
Cotton - HDC - 8 G1114 Marker 13.9 (cM) Automated name-based View Maps
Cotton - GVc - 8 G1114 Marker 6.9 (cM) Automated name-based View Maps
Gafb13B07 Marker 109.1 Cotton - HDC - 8 Gafb13B07 Marker 123.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 Gafb13B07 Marker Cotton 25,056,352 - 25,057,042 (bp) Automated name-based View Maps
Cotton - PK - c2 Gafb13B07 Marker 92.4 (cM) Automated name-based View Maps
Cotton - HDC - 2 Gafb13B07 Marker 60.3 (cM) Automated name-based View Maps
Gate1AB06 Marker 97.1 Cotton - HDC - 8 Gate1AB06 Marker 103.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 Gate1AB06 Marker Cotton 48,276,471 - 48,276,939 (bp) Automated name-based View Maps
Gate1AF01 Marker 41.3 Cotton - HDC - 8 Gate1AF01 Marker 38.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gate1AF01 Marker Cotton 58,293,703 - 58,294,173 (bp) Automated name-based View Maps
Gate1BF02 Marker 112.3 Cotton - PK - A03 Gate1BF02 Marker 184.3 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gate1BF02 Marker 124.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Gate1BF02 Marker Cotton 1,802,830 - 1,803,540 (bp) Automated name-based View Maps
Cotton - HDC - 11 Gate1BF02 Marker 33.9 (cM) Automated name-based View Maps
Gate1BH09 Marker 117.9 Cotton - HDC - 20 Gate1BH09 Marker 46.4 (cM) Automated name-based View Maps
Cotton - PK - c20 Gate1BH09 Marker 115.3 (cM) Automated name-based View Maps
Cotton - PK - c20 Gate1BH09 Marker 91 (cM) Automated name-based View Maps
Cotton - HDC - 8 Gate1BH09 Marker 126.2 (cM) Automated name-based View Maps
Cotton - HDC - 20 Gate1BH09 Marker 74.3 (cM) Automated name-based View Maps