CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A03
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: A03
Map Start: 0 cM
Map Stop: 198 cM
Features by Type:
105 Marker
19 QTL
124 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 124.       of 5 | Next
Cotton - PK - A03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unig06E08 Marker 159.2 Cotton - HDC - 11 Unig06E08 Marker 51 (cM) Automated name-based View Maps
Cotton - PK - D02 Unig06E08 Marker 141.8 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig06E08 Marker 82 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Unig06E08 Marker Cotton 6,202,061 - 6,202,774 (bp) Automated name-based View Maps
Unig22D03 Marker 10.3 Cotton - HDC - 11 Unig22D03 Marker 185 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Unig22D03 Marker Cotton 58,005,757 - 58,006,008 (bp) Automated name-based View Maps
Cotton - PK - D02 Unig22D03 Marker 5.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig22D03 Marker 147.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig22D03 Marker 186.3 (cM) Automated name-based View Maps
Unig22H11 Marker 15.2 Cotton - PK - D02 Unig22H11 Marker 11.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig22H11 Marker 182.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 Unig22H11 Marker 66 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig22H11 Marker 144.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Unig22H11 Marker Cotton 47,178,176 - 47,178,840 (bp) Automated name-based View Maps
Cotton - PK - c12 Unig22H11 Marker 56.3 (cM) Automated name-based View Maps
Unig24A10 Marker 104.2 Cotton - PK - D02 Unig24A10 Marker 94.9 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig24A10 Marker 109.6 (cM) Automated name-based View Maps
Cotton - PK - D02 Unig24A10 Marker 97.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig24A10 Marker 111.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig24A10 Marker 111.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig24A10 Marker 109 (cM) Automated name-based View Maps
Unig24D01 Marker 116.4 Cotton - HDC - 11 Unig24D01 Marker 102.2 (cM) Automated name-based View Maps
Unig26B04 Marker 59.2 Cotton - Graimondii_physical - Gr_Chr11 Unig26B04 Marker Cotton 3,172,841 - 3,173,512 (bp) Automated name-based View Maps
Cotton - PK - c7 Unig26B04 Marker 44.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 Unig26B04 Marker 30 (cM) Automated name-based View Maps
Cotton - HDC - 11 Unig26B04 Marker 145.7 (cM) Automated name-based View Maps
A1345 Marker 159.2 Cotton - HDC - 8 CLU3 Marker 103.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 A1345 Marker 0 (cM) Automated name-based View Maps
Cotton - PK - A02 A1345 Marker 91.9 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU3 Marker 51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 A1345 Marker 2.97 (cM) Automated name-based View Maps
A1460 Marker 21.4 Cotton - Graimondii_physical - Gr_Chr07 A1460 Marker Cotton 54,062,394 - 54,063,257 (bp) Automated name-based View Maps
Cotton - HDC - 11 A1460 Marker 177 (cM) Automated name-based View Maps
A1672 Marker 102.1 Cotton - HDC - 11 A1672 Marker 112.6 (cM) Automated name-based View Maps
BNL1034 Marker 164.4 Cotton - E3 - 11 BNL1034 Marker 184.6 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL1034 Marker 137.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL1034 Marker 123.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1034b Marker 126.68 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1034 Marker 72.6 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL1034 Marker 195.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL1034 Marker 91.6 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL1034 Marker 31.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL1034 Marker 203.6 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL1034 Marker 31.3 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL1034 Marker 37.9 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL1034 Marker 43.27 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1034 Marker 48 (cM) Automated name-based View Maps
BNL1231 Marker 13.1 Cotton - T3 - 21 BNL1231 Marker 113.36 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1231 Marker 183.9 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL1231 Marker 140.86 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL1231 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL1231 Marker 29 (cM) Automated name-based View Maps
Cotton - PK - D02 BNL1231 Marker 10.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D02 BNL1231 Marker 10.1 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1231 Marker 144.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL1231 Marker Cotton 57,124,940 - 57,125,230 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL1231 Marker 31.3 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL1231 Marker 30.5 (cM) Automated name-based View Maps
BNL0840 Marker 75.9 Cotton - PK - c26 BNL0840 Marker 117.3 (cM) Automated name-based View Maps
Cotton - E3 - 26 BNL0840 Marker 30 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL0840 Marker 118.4 (cM) Automated name-based View Maps
Cotton - T3 - 26 BNL0840 Marker 28.37 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL0840 Marker 59.9 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL0840 Marker 51.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL0840 Marker Cotton 15,517,193 - 15,517,526 (bp) Automated name-based View Maps
BNL3431 Marker 145.9 Cotton - TH - 11 BNL3431 Marker 119.4 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3431 Marker 167.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL3431 Marker 102.4 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL3431 Marker 48.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL3431 Marker 176.8 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL3431 Marker 160 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3431 Marker Cotton 51,972,285 - 51,972,935 (bp) Automated name-based View Maps
Cotton - HDC - 11 BNL3431 Marker 70.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 BNL3431 Marker 60.01 (cM) Automated name-based View Maps
BNL0625 Marker 69.4 Cotton - TH - 11 BNL0625 Marker 81.7 (cM) Automated name-based View Maps
Cotton - PK - c12 BNL0625 Marker 83.8 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL0625 Marker 86.8 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL0625 Marker 130.2 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL0625 Marker 137.2 (cM) Automated name-based View Maps
Cotton - PK - c4 BNL0625 Marker 22.5 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL0625 Marker 119.3 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL0625 Marker 99.78 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL0625 Marker Cotton 28,319,538 - 28,319,828 (bp) Automated name-based View Maps
Cotton - TH - 11 BNL0625 Marker 76.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL0625 Marker 56.3 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL0625 Marker 98.3 (cM) Automated name-based View Maps
Coau1B02 Marker 69.4 Cotton - HDC - 11 Coau1B02 Marker 137.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Coau1B02 Marker Cotton 25,763,361 - 25,764,021 (bp) Automated name-based View Maps
Coau2E22 Marker 174.2 Cotton - Graimondii_physical - Gr_Chr07 Coau2E22 Marker Cotton 1,838,921 - 1,839,507 (bp) Automated name-based View Maps
Cotton - HDC - 11 Coau2E22 Marker 41.6 (cM) Automated name-based View Maps
Coau2K17 Marker 47.5 Cotton - Graimondii_physical - Gr_Chr05 Coau2K17 Marker Cotton 25,349,544 - 25,350,210 (bp) Automated name-based View Maps
Cotton - PK - A01 Coau2K17 Marker 92.8 (cM) Automated name-based View Maps
Cotton - HDC - 11 Coau2K17 Marker 155.4 (cM) Automated name-based View Maps
Cotton - HDC - 13 Coau2K17 Marker 67.3 (cM) Automated name-based View Maps
Coau4D17 Marker 84.4 Cotton - HDC - 21 Coau4D17 Marker 119.9 (cM) Automated name-based View Maps
Cotton - HDC - 11 Coau4D17 Marker 125.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Coau4D17 Marker Cotton 67,832,594 - 67,833,221 (bp) Automated name-based View Maps
Cotton - PK - D02 Coau4D17 Marker 83.7 (cM) Automated name-based View Maps
G1045 Marker 96 Cotton - HDC - 11 G1045 Marker 117.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 G1045 Marker 61.9 (cM) Automated name-based View Maps
Cotton - PK - c26 G1045 Marker 154.4 (cM) Automated name-based View Maps
Cotton - HDC - 4 G1045 Marker 70.3 (cM) Automated name-based View Maps
Cotton - PK - c7 G1045 Marker 119.4 (cM) Automated name-based View Maps
Cotton - PK - c4 G1045 Marker 51.5 (cM) Automated name-based View Maps
Cotton - HDC - 26 G1045 Marker 18.6 (cM) Automated name-based View Maps
G1082 Marker 168.6 Cotton - HDC - 11 G1082 Marker 45.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 G1082 Marker Cotton 5,168,082 - 5,168,687 (bp) Automated name-based View Maps
G1199 Marker 198 Cotton - HDC - 11 G1199 Marker 21.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 G1199 Marker Cotton 177,247 - 178,248 (bp) Automated name-based View Maps
Gafb24M11 Marker 145.9 Cotton - Graimondii_physical - Gr_Chr07 Gafb24M11 Marker Cotton 10,089,081 - 10,089,823 (bp) Automated name-based View Maps
Cotton - HDC - 11 Gafb24M11 Marker 72.8 (cM) Automated name-based View Maps
Gate1AF05 Marker 185.4 Cotton - HDC - 11 Gate1AF05 Marker 32.9 (cM) Automated name-based View Maps
Gate1BC11 Marker 104.2 Cotton - Graimondii_physical - Gr_Chr07 Gate1BC11 Marker Cotton 17,630,028 - 17,630,701 (bp) Automated name-based View Maps
Cotton - HDC - 11 Gate1BC11 Marker 111.1 (cM) Automated name-based View Maps
Gate1BF07 Marker 84.4 Cotton - HDC - 21 Gate1BF07 Marker 75.6 (cM) Automated name-based View Maps
Cotton - HDC - 11 Gate1BF07 Marker 125.5 (cM) Automated name-based View Maps
Cotton - PK - D02 Gate1BF07 Marker 154.8 (cM) Automated name-based View Maps