CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D08
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: D08
Map Start: 0 cM
Map Stop: 242 cM
Features by Type:
157 Marker
25 QTL
182 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 182.       of 8 | Next
Cotton - PK - D08
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
pARC_06 Marker 95.6 Cotton - HDC - 19 pARC_06 Marker 118.9 (cM) Automated name-based View Maps
BNL0852 Marker 98.6 Cotton - HDC - 19 BNL0852 Marker 116 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL0852 Marker 48.9 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL0852 Marker 68.1 (cM) Automated name-based View Maps
Cotton - HDC - 19 BNL0852 Marker 118.6 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL0852 Marker 65.2 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL0852 Marker 74.1 (cM) Automated name-based View Maps
Cotton - PK - A01 BNL0852 Marker 100.9 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL0852 Marker 93.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL0852 Marker Cotton 12,109,201 - 12,109,514 (bp) Automated name-based View Maps
Cotton - CH - 19 BNL0852 Marker 132.1 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL0852 Marker 73.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL0852 Marker 69.6 (cM) Automated name-based View Maps
pGH215 Marker 136.7 Cotton - Graimondii_physical - Gr_Chr09 pGH215 Marker Cotton 21,286,644 - 21,287,541 (bp) Automated name-based View Maps
Cotton - HDC - 19 pGH215 Marker 88.7 (cM) Automated name-based View Maps
Coau1A21 Marker 189.6 Cotton - Graimondii_physical - Gr_Chr09 Coau1A21 Marker Cotton 50,994,635 - 50,995,288 (bp) Automated name-based View Maps
Cotton - HDC - 19 Coau1A21 Marker 50.9 (cM) Automated name-based View Maps
pGH239 Marker 99.9 Cotton - Guazuncho2xVH8-BC1 - D08 pGH239 Marker 96.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pGH239 Marker Cotton 14,229,726 - 14,230,478 (bp) Automated name-based View Maps
Cotton - GVc - 19 pGH239 Marker 79.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 pGH239 Marker 112.1 (cM) Automated name-based View Maps
Coau1F22 Marker 95.6 Cotton - Graimondii_physical - Gr_Chr09 Coau1F22 Marker Cotton 12,049,737 - 12,050,402 (bp) Automated name-based View Maps
Cotton - HDC - 19 Coau1F22 Marker 118.9 (cM) Automated name-based View Maps
pGH489 Marker 14.1 Cotton - HDC - 19 pGH489 Marker 172.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pGH489 Marker Cotton 2,147,989 - 2,148,741 (bp) Automated name-based View Maps
Coau2C01 Marker 176.6 Cotton - HDC - 5 Coau2C01 Marker 43.7 (cM) Automated name-based View Maps
Cotton - HDC - 19 Coau2C01 Marker 63.3 (cM) Automated name-based View Maps
Cotton - PK - c5 Coau2C01 Marker 165.3 (cM) Automated name-based View Maps
pGH777 Marker 177.9 Cotton - Graimondii_physical - Gr_Chr10 pGH777 Marker Cotton 7,989,486 - 7,989,931 (bp) Automated name-based View Maps
Cotton - HDC - 19 pGH777 Marker 62.5 (cM) Automated name-based View Maps
Coau2E09 Marker 105.5 Cotton - Graimondii_physical - Gr_Chr09 Coau2E09 Marker Cotton 15,487,165 - 15,487,738 (bp) Automated name-based View Maps
Cotton - HDC - 19 Coau2E09 Marker 108.5 (cM) Automated name-based View Maps
PVNC052 Marker 171.8 Cotton - HDC - 19 pVNC052 Marker 66.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 PVNC052 Marker Cotton 23,370,804 - 23,371,213 (bp) Automated name-based View Maps
Coau3C10 Marker 168.4 Cotton - HDC - 19 Coau3C10 Marker 68.5 (cM) Automated name-based View Maps
Cotton - PK - c25 Coau3C10 Marker 142.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 Coau3C10 Marker 20 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Coau3C10 Marker Cotton 52,557,035 - 52,557,745 (bp) Automated name-based View Maps
PVNC061 Marker 112.1 Cotton - PK - c5 PVNC061 Marker 83.1 (cM) Automated name-based View Maps
Cotton - HDC - 19 pVNC061 Marker 104.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 pVNC061 Marker 84.1 (cM) Automated name-based View Maps
G1004 Marker 136.7 Cotton - PK - c5 G1004 Marker 117.3 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU194 Marker 88.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU194 Marker 81.7 (cM) Automated name-based View Maps
pVNC173 Marker 177.9 Cotton - HDC - 19 pVNC173 Marker 62.5 (cM) Automated name-based View Maps
G1066 Marker 94.4 Cotton - HDC - 19 G1066 Marker 120 (cM) Automated name-based View Maps
PVNC416 Marker 108.2 Cotton - HDC - 5 pVNC416 Marker 83.6 (cM) Automated name-based View Maps
Cotton - PK - c5 PVNC416 Marker 89.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 pVNC416 Marker 106.8 (cM) Automated name-based View Maps
G1119 Marker 98.8 Cotton - Graimondii_physical - Gr_Chr09 G1119 Marker Cotton 14,359,859 - 14,360,368 (bp) Automated name-based View Maps
Cotton - HDC - 19 G1119 Marker 115.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 G1119 Marker 84.1 (cM) Automated name-based View Maps
Cotton - PK - c5 G1119 Marker 83.1 (cM) Automated name-based View Maps
R6592A14DL Marker 189.6 Cotton - HDC - 19 R6592A14DL Marker 50.9 (cM) Automated name-based View Maps
G1219 Marker 130.1 Cotton - Graimondii_physical - Gr_Chr09 G1219 Marker Cotton 19,567,510 - 19,568,358 (bp) Automated name-based View Maps
Cotton - HDC - 19 G1219 Marker 92.9 (cM) Automated name-based View Maps
Unig22D05 Marker 56.1 Cotton - HDC - 19 Unig22D05 Marker 149.7 (cM) Automated name-based View Maps
Cotton - PK - c5 Unig22D05 Marker 50.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 Unig22D05 Marker 86.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig22D05 Marker Cotton 7,378,252 - 7,378,591 (bp) Automated name-based View Maps
Gafb22M15 Marker 72.3 Cotton - HDC - 19 Gafb22M15 Marker 138 (cM) Automated name-based View Maps
Cotton - PK - c26 Gafb22M15 Marker 116.4 (cM) Automated name-based View Maps
Cotton - HDC - 26 Gafb22M15 Marker 60.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 Gafb22M15 Marker Cotton 4,088,964 - 4,089,856 (bp) Automated name-based View Maps
Unig23D12 Marker 75.2 Cotton - HDC - 19 Unig23D12 Marker 135.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Unig23D12 Marker Cotton 56,369,331 - 56,369,929 (bp) Automated name-based View Maps
Cotton - HDC - 19 Unig23D12 Marker 137 (cM) Automated name-based View Maps
Gate1BB10 Marker 55.2 Cotton - HDC - 19 Gate1BB10 Marker 150.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate1BB10 Marker Cotton 1,808,320 - 1,808,685 (bp) Automated name-based View Maps
Unig25H05 Marker 238 Cotton - HDC - 19 Unig25H05 Marker 11.1 (cM) Automated name-based View Maps