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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
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Maps c10
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c10
Map Start: 0 cM
Map Stop: 182.7 cM
Features by Type:
99 Marker
4 QTL
103 Total

Map Features

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Items 1 to 25 of 103.       of 5 | Next
Cotton - PK - c10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Coau1E05 Marker 117.2 Cotton - HDC - 10 Coau1E05 Marker 70.4 (cM) Automated name-based View Maps
Coau3F17 Marker 75.3 Cotton - PK - c5 Coau3F17 Marker 184 (cM) Automated name-based View Maps
Cotton - HDC - 5 Coau3F17 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 Coau3F17 Marker 106.8 (cM) Automated name-based View Maps
G1059 Marker 78.7 Cotton - HDC - 10 G1059 Marker 103.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 G1059 Marker Cotton 37,020,673 - 37,020,929 (bp) Automated name-based View Maps
G1272 Marker 40 Cotton - HDC - 10 G1272 Marker 138 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 G1272 Marker Cotton 13,732,322 - 13,733,839 (bp) Automated name-based View Maps
Gate1AB08 Marker 80.1 Cotton - HDC - 10 Gate1AB08 Marker 102.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate1AB08 Marker 22.7 (cM) Automated name-based View Maps
Cotton - PK - c18 Gate1AB08 Marker 55.5 (cM) Automated name-based View Maps
Cotton - PK - c9 Gate1AB08 Marker 25.4 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gate1AB08 Marker 67.5 (cM) Automated name-based View Maps
Gate1BC08 Marker 126.1 Cotton - HDC - 10 Gate1BC08 Marker 61.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate1BC08 Marker Cotton 51,285,650 - 51,286,323 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate1BC08 Marker 70.4 (cM) Automated name-based View Maps
Cotton - PK - c20 Gate1BC08 Marker 94.6 (cM) Automated name-based View Maps
Gate1BE03 Marker 49.9 Cotton - HDC - 10 Gate1BE03 Marker 132.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 Gate1BE03 Marker Cotton 40,170,727 - 40,171,419 (bp) Automated name-based View Maps
Gate1CB10 Marker 76.1 Cotton - Graimondii_physical - Gr_Chr11 Gate1CB10 Marker Cotton 37,890,915 - 37,891,452 (bp) Automated name-based View Maps
Cotton - HDC - 10 Gate1CB10 Marker 106.1 (cM) Automated name-based View Maps
Cotton - PK - c14 Gate1CB10 Marker 26.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 Gate1CB10 Marker 113.2 (cM) Automated name-based View Maps
Gate1CE10 Marker 109.8 Cotton - HDC - 10 Gate1CE10 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Gate1CE10 Marker Cotton 11,475,378 - 11,476,074 (bp) Automated name-based View Maps
Gate1DF08 Marker 77.4 Cotton - Graimondii_physical - Gr_Chr11 Gate1DF08 Marker Cotton 10,302,414 - 10,303,086 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate1DF08 Marker 103.5 (cM) Automated name-based View Maps
Cotton - PK - c20 Gate1DF08 Marker 63.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate1DF08 Marker 105 (cM) Automated name-based View Maps
Gate2AC08 Marker 175.2 Cotton - HDC - 10 Gate2AC08 Marker 7.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate2AC08 Marker Cotton 62,237,083 - 62,237,567 (bp) Automated name-based View Maps
Gate2BF02 Marker 68 Cotton - HDC - 19 Gate2BF02 Marker 162 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gate2BF02 Marker Cotton 45,567,553 - 45,568,235 (bp) Automated name-based View Maps
Cotton - PK - D08 Gate2BF02 Marker 29.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate2BF02 Marker 113 (cM) Automated name-based View Maps
Gate2CC04 Marker 68 Cotton - HDC - 10 Gate2CC04 Marker 113 (cM) Automated name-based View Maps
Cotton - PK - c18 Gate2CC04 Marker 30.3 (cM) Automated name-based View Maps
Cotton - HDC - 18 Gate2CC04 Marker 96 (cM) Automated name-based View Maps
Gate3BB05 Marker 102.6 Cotton - HDC - 10 Gate3BB05 Marker 86.6 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate3BB05 Marker 83.6 (cM) Automated name-based View Maps
Gate3BE04 Marker 149.5 Cotton - PK - D03 Gate3BE04 Marker 181 (cM) Automated name-based View Maps
Cotton - HDC - 24 Gate3BE04 Marker 156 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate3BE04 Marker 34.4 (cM) Automated name-based View Maps
Gate3CA08 Marker 109 Cotton - HDC - 10 Gate3CA08 Marker 78.2 (cM) Automated name-based View Maps
Gate3CB05 Marker 109.8 Cotton - HDC - 10 Gate3CB05 Marker 81.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate3CB05 Marker 77.5 (cM) Automated name-based View Maps
Gate3CD03 Marker 105.1 Cotton - HDC - 10 Gate3CD03 Marker 81.5 (cM) Automated name-based View Maps
Gate3CG03 Marker 105.9 Cotton - HDC - 10 Gate3CG03 Marker 80.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate3CG03 Marker 83.6 (cM) Automated name-based View Maps
Gate4AD08 Marker 66.1 Cotton - Graimondii_physical - Gr_Chr11 Gate4AD08 Marker Cotton 14,349,102 - 14,349,903 (bp) Automated name-based View Maps
Cotton - HDC - 10 Gate4AD08 Marker 114.6 (cM) Automated name-based View Maps
Gate4AG08 Marker 48.1 Cotton - PK - c20 Gate4AG08 Marker 53.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate4AG08 Marker Cotton 5,446,627 - 5,447,453 (bp) Automated name-based View Maps
Cotton - HDC - 20 Gate4AG08 Marker 115.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate4AG08 Marker 133.4 (cM) Automated name-based View Maps
Gate4BC08 Marker 118.5 Cotton - Graimondii_physical - Gr_Chr11 Gate4BC08 Marker Cotton 47,249,723 - 47,250,489 (bp) Automated name-based View Maps
Cotton - HDC - 10 Gate4BC08 Marker 69.2 (cM) Automated name-based View Maps
Gate4CA04 Marker 107.8 Cotton - HDC - 10 Gate4CA04 Marker 81.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 Gate4CA04 Marker 79.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate4CA04 Marker Cotton 18,404,053 - 18,404,695 (bp) Automated name-based View Maps
Gate4DF11 Marker 102.6 Cotton - HDC - 10 Gate4DF11 Marker 83.6 (cM) Automated name-based View Maps
Gate4DG06 Marker 102.6 Cotton - HDC - 10 Gate4DG06 Marker 83.6 (cM) Automated name-based View Maps