CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c14
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c14
Map Start: 0 cM
Map Stop: 164.8 cM
Features by Type:
112 Marker
19 QTL
131 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 131.       of 6 | Next
Cotton - PK - c14
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PXP4_65 Marker 59.4 Cotton - HDC - 14 pXP4_65 Marker 85.9 (cM) Automated name-based View Maps
Cotton - PK - c2 PXP4_65 Marker 63.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 pXP4_65 Marker 69.5 (cM) Automated name-based View Maps
Unig06F11 Marker 90.1 Cotton - Graimondii_physical - Gr_Chr02 Unig06F11 Marker Cotton 52,045,373 - 52,046,029 (bp) Automated name-based View Maps
Cotton - HDC - 14 Unig06F11 Marker 61.9 (cM) Automated name-based View Maps
A1167 Marker 104.1 Cotton - HDC - 14 A1167 Marker 50 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 A1167 Marker Cotton 56,802,354 - 56,803,239 (bp) Automated name-based View Maps
Unig25A02 Marker 47.9 Cotton - PK - c2 Unig25A02 Marker 55.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 Unig25A02 Marker 95.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 Unig25A02 Marker 14.08 (cM) Automated name-based View Maps
Cotton - HDC - 2 Unig25A02 Marker 84.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Unig25A02 Marker Cotton 5,146,138 - 5,146,511 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 Unig25A02 Marker 33.9 (cM) Automated name-based View Maps
Cotton - HDC - 14 Unig25A02 Marker 119 (cM) Automated name-based View Maps
Cotton - GVc - 2 Unig25A02 Marker 20.1 (cM) Automated name-based View Maps
A1449 Marker 93.6 Cotton - Graimondii_physical - Gr_Chr05 A1449 Marker Cotton 51,786,512 - 51,787,006 (bp) Automated name-based View Maps
Cotton - HDC - 14 A1449 Marker 59 (cM) Automated name-based View Maps
Cotton - PK - c3 A1449 Marker 93.7 (cM) Automated name-based View Maps
Cotton - HDC - 3 A1449 Marker 58.8 (cM) Automated name-based View Maps
Unig28A12 Marker 135 Cotton - PK - D02 Unig28A12 Marker 62.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 Unig28A12 Marker 24.2 (cM) Automated name-based View Maps
Cotton - HDC - 21 Unig28A12 Marker 126.7 (cM) Automated name-based View Maps
A1580 Marker 32.9 Cotton - HDC - 14 A1580 Marker 108.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 A1580 Marker Cotton 4,399,188 - 4,399,444 (bp) Automated name-based View Maps
Unig28C12 Marker 87.1 Cotton - HDC - 14 Unig28C12 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Unig28C12 Marker Cotton 18,844,380 - 18,845,019 (bp) Automated name-based View Maps
BNL1059 Marker 71.1 Cotton - GVc - 14 BNL1059 Marker 55.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL1059 Marker 78.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL1059a Marker 51.63 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL1059 Marker 40.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL1059 Marker 76.8 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL1059 Marker 37.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL1059 Marker 68.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL1059b Marker 26.08 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL1059 Marker 41 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL1059 Marker 69.1 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL1059 Marker 14.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL1059 Marker Cotton 35,898,072 - 35,898,293 (bp) Automated name-based View Maps
Cotton - CH - 14 BNL1059 Marker 94.4 (cM) Automated name-based View Maps
W07 Marker 104.1 Cotton - Graimondii_physical - Gr_Chr05 W07 Marker Cotton 46,300,939 - 46,301,562 (bp) Automated name-based View Maps
Cotton - PK - c3 W07 Marker 77.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 W07 Marker 50 (cM) Automated name-based View Maps
Cotton - HDC - 3 W07 Marker 73.9 (cM) Automated name-based View Maps
BNL0226 Marker 120 Cotton - GVc - 14 BNL0226 Marker 78.7 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL0226 Marker 130.8 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL0226 Marker 104.2 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL0226 Marker 55.9 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL0226 Marker 46.98 (cM) Automated name-based View Maps
Cotton - PK - c3 BNL0226 Marker 96.9 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0226 Marker 53.5 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL0226 Marker 62.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 BNL0226 Marker Cotton 53,481,303 - 53,481,585 (bp) Automated name-based View Maps
Cotton - TH - 3 BNL0226 Marker 16.7 (cM) Automated name-based View Maps
BNL3034 Marker 104.1 Cotton - Graimondii_physical - Gr_Chr05 BNL3034 Marker Cotton 56,263,217 - 56,263,405 (bp) Automated name-based View Maps
Cotton - TH - 14 BNL3034 Marker 54.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3034 Marker 52.8 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL3034 Marker 22.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3034 Marker 43.08 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3034 Marker 52.2 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3034 Marker 120.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3034 Marker 50 (cM) Automated name-based View Maps
BNL3888 Marker 62.1 Cotton - HDC - 14 BNL3888 Marker 83.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL3888 Marker 185.5 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL3888 Marker 131.6 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL3888 Marker 60.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL3888 Marker 76.29 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL3888 Marker 43.9 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL3888 Marker 89.3 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL3888 Marker 41.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL3888 Marker 96.7 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3888 Marker 92.1 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL3888 Marker 93.6 (cM) Automated name-based View Maps
C102 Marker 35.5 Cotton - HDC - 14 C102 Marker 106.3 (cM) Automated name-based View Maps
Coau1L22 Marker 68.4 Cotton - HDC - 14 Coau1L22 Marker 77.3 (cM) Automated name-based View Maps
Coau4E21 Marker 91.8 Cotton - Guazuncho2xVH8-RIL - c16 Coau4E21 Marker 12.73 (cM) Automated name-based View Maps
Cotton - HDC - 16 Coau4E21 Marker 48.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 Coau4E21 Marker Cotton 61,993,647 - 61,994,301 (bp) Automated name-based View Maps
Cotton - GVc - 16 Coau4E21 Marker 50.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 Coau4E21 Marker 60.5 (cM) Automated name-based View Maps
Coau4N12 Marker 32.9 Cotton - HDC - 14 Coau4N12 Marker 108.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Coau4N12 Marker Cotton 2,244,451 - 2,245,111 (bp) Automated name-based View Maps
Cotton - HDC - 19 Coau4N12 Marker 53.9 (cM) Automated name-based View Maps
Cotton - PK - D08 Coau4N12 Marker 186.6 (cM) Automated name-based View Maps
ESTS154 Marker 72.3 Cotton - Graimondii_physical - Gr_Chr13 ESTS154 Marker Cotton 32,672,198 - 32,672,716 (bp) Automated name-based View Maps
Cotton - HDC - 14 ESTS154 Marker 76.1 (cM) Automated name-based View Maps
G1012 Marker 34.7 Cotton - HDC - 14 G1012 Marker 105.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 G1012 Marker 18.8 (cM) Automated name-based View Maps
Cotton - GVc - 14 G1012 Marker 20.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 G1012 Marker Cotton 4,336,685 - 4,337,959 (bp) Automated name-based View Maps
G1124 Marker 164.8 Cotton - HDC - 14 G1124 Marker 8.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 G1124 Marker Cotton 64,063,734 - 64,065,007 (bp) Automated name-based View Maps
G1147 Marker 104.7 Cotton - Graimondii_physical - Gr_Chr05 G1147 Marker Cotton 57,239,304 - 57,239,863 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 G1147 Marker 121.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 G1147 Marker 49 (cM) Automated name-based View Maps
Cotton - GVc - 14 G1147 Marker 82.7 (cM) Automated name-based View Maps
G1210 Marker 51.8 Cotton - HDC - 14 G1210 Marker 92.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 G1210 Marker Cotton 5,847,613 - 5,848,164 (bp) Automated name-based View Maps
Gate1AD07 Marker 44.2 Cotton - HDC - 14 Gate1AD07 Marker 98.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gate1AD07 Marker Cotton 5,262,195 - 5,262,665 (bp) Automated name-based View Maps
Gate1BE06 Marker 58.5 Cotton - Graimondii_physical - Gr_Chr05 Gate1BE06 Marker Cotton 6,827,736 - 6,828,440 (bp) Automated name-based View Maps
Cotton - HDC - 14 Gate1BE06 Marker 86.7 (cM) Automated name-based View Maps
Gate1CC07 Marker 113.9 Cotton - Graimondii_physical - Gr_Chr12 Gate1CC07 Marker Cotton 32,098,359 - 32,099,201 (bp) Automated name-based View Maps
Cotton - HDC - 14 Gate1CC07 Marker 34.2 (cM) Automated name-based View Maps