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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-PK
(Reference Set)
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Correspondences
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Maps c1
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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QTL
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c1
Map Start: 0 cM
Map Stop: 147.3 cM
Features by Type:
76 Marker
13 QTL
89 Total

Map Features

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Items 1 to 25 of 89.       of 4 | Next
Cotton - PK - c1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
A1097 Marker 72.4 Cotton - HDC - 1 A1097 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1097 Marker Cotton 49,090,241 - 49,091,885 (bp) Automated name-based View Maps
A1155 Marker 57.9 Cotton - HDC - 1 A1155 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1155 Marker Cotton 58,192,946 - 58,194,155 (bp) Automated name-based View Maps
A1204 Marker 145.7 Cotton - HDC - 1 A1204 Marker 89.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1204 Marker Cotton 10,735,786 - 10,736,302 (bp) Automated name-based View Maps
Cotton - HDC - 1 A1204 Marker 92.2 (cM) Automated name-based View Maps
Cotton - GVc - 1 A1204 Marker 96 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1204 Marker 183.8 (cM) Automated name-based View Maps
A1485 Marker 39.3 Cotton - Guazuncho2xVH8-BC1 - c15 A1485 Marker 22.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1485 Marker Cotton 60,213,673 - 60,214,262 (bp) Automated name-based View Maps
Cotton - GVc - 15 A1485 Marker 19.3 (cM) Automated name-based View Maps
Cotton - HDC - 15 A1485 Marker 43.4 (cM) Automated name-based View Maps
Cotton - HDC - 1 A1485 Marker 41.3 (cM) Automated name-based View Maps
A1593 Marker 112 Cotton - GVc - 1 A1593 Marker 76.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1593 Marker 158.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1593 Marker Cotton 15,292,271 - 15,293,461 (bp) Automated name-based View Maps
Cotton - HDC - 1 A1593 Marker 77.3 (cM) Automated name-based View Maps
A1686 Marker 97.3 Cotton - PK - c15 A1686 Marker 78.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 A1686 Marker 84.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1686 Marker 155.5 (cM) Automated name-based View Maps
Cotton - HDC - 1 A1686 Marker 70.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 A1686 Marker 67.9 (cM) Automated name-based View Maps
A1794 Marker 76.6 Cotton - HDC - 1 A1794 Marker 60.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 A1794 Marker Cotton 51,290,237 - 51,291,977 (bp) Automated name-based View Maps
BNL2921 Marker 100 Cotton - Graimondii_physical - Gr_Chr02 BNL2921 Marker Cotton 27,353,761 - 27,354,213 (bp) Automated name-based View Maps
Cotton - TH - 1 BNL2921 Marker 72.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL2921 Marker 39 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL2921 Marker 73.6 (cM) Automated name-based View Maps
Cotton - T3 - 1 BNL2921 Marker 63.24 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL2921 Marker 39.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL2921 Marker 115.3 (cM) Automated name-based View Maps
Cotton - HDC - 1 BNL2921 Marker 60.4 (cM) Automated name-based View Maps
C209 Marker 108.7 Cotton - HDC - 1 C209 Marker 75.9 (cM) Automated name-based View Maps
CMS25 Marker 147.2 Cotton - HDC - 1 CMS25 Marker 93.1 (cM) Automated name-based View Maps
Coau1I11 Marker 34.7 Cotton - HDC - 9 Coau1I11 Marker 87.3 (cM) Automated name-based View Maps
Cotton - PK - c9 Coau1I11 Marker 85 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Coau1I11 Marker Cotton 60,465,483 - 60,466,179 (bp) Automated name-based View Maps
Cotton - HDC - 1 Coau1I11 Marker 39 (cM) Automated name-based View Maps
Coau2C11 Marker 106.5 Cotton - PK - D08 Coau2C11 Marker 94.4 (cM) Automated name-based View Maps
Cotton - HDC - 19 Coau2C11 Marker 120 (cM) Automated name-based View Maps
Cotton - HDC - 1 Coau2C11 Marker 74.9 (cM) Automated name-based View Maps
Coau2O20 Marker 110.9 Cotton - HDC - 1 Coau2O20 Marker 76.8 (cM) Automated name-based View Maps
Coau4A11 Marker 100 Cotton - HDC - 1 Coau4A11 Marker 72 (cM) Automated name-based View Maps
Cotton - PK - c3 Coau4A11 Marker 62.9 (cM) Automated name-based View Maps
Cotton - HDC - 3 Coau4A11 Marker 89.4 (cM) Automated name-based View Maps
G1051 Marker 39.3 Cotton - PK - c15 G1051 Marker 37.5 (cM) Automated name-based View Maps
Cotton - PK - c15 G1051 Marker 37.9 (cM) Automated name-based View Maps
Cotton - HDC - 1 G1051 Marker 41.3 (cM) Automated name-based View Maps
Cotton - HDC - 15 G1051 Marker 49.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 G1051 Marker 49.1 (cM) Automated name-based View Maps
G1171 Marker 147.2 Cotton - HDC - 1 G1171 Marker 93.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 G1171 Marker Cotton 3,872,799 - 3,873,951 (bp) Automated name-based View Maps
Gate1AB12 Marker 112 Cotton - HDC - 1 Gate1AB12 Marker 77.3 (cM) Automated name-based View Maps
Cotton - HDC - 15 Gate1AB12 Marker 176 (cM) Automated name-based View Maps
Cotton - PK - c15 Gate1AB12 Marker 134.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate1AB12 Marker Cotton 16,014,719 - 16,015,067 (bp) Automated name-based View Maps
Gate1CB06 Marker 138.4 Cotton - Graimondii_physical - Gr_Chr02 Gate1CB06 Marker Cotton 7,417,463 - 7,418,302 (bp) Automated name-based View Maps
Cotton - HDC - 1 Gate1CB06 Marker 90.7 (cM) Automated name-based View Maps
Gate2AC04 Marker 115.7 Cotton - HDC - 1 Gate2AC04 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate2AC04 Marker Cotton 14,949,871 - 14,950,549 (bp) Automated name-based View Maps
Gate2DG06 Marker 112 Cotton - HDC - 1 Gate2DG06 Marker 77.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gate2DG06 Marker Cotton 53,512,051 - 53,512,649 (bp) Automated name-based View Maps
Gate3CC02 Marker 44.8 Cotton - HDC - 1 Gate3CC02 Marker 39.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 Gate3CC02 Marker 53.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 Gate3CC02 Marker 44.1 (cM) Automated name-based View Maps
Cotton - PK - c15 Gate3CC02 Marker 41.1 (cM) Automated name-based View Maps
Gate3CE05 Marker 117.6 Cotton - HDC - 1 Gate3CE05 Marker 78.7 (cM) Automated name-based View Maps
Gate4CA01 Marker 12.3 Cotton - Graimondii_physical - Gr_Chr02 Gate4CA01 Marker Cotton 61,340,987 - 61,341,702 (bp) Automated name-based View Maps
Cotton - PK - c22 Gate4CA01 Marker 36.8 (cM) Automated name-based View Maps
Cotton - HDC - 1 Gate4CA01 Marker 27.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gate4CA01 Marker 57.3 (cM) Automated name-based View Maps
P09_54 Marker 72.4 Cotton - HDC - 1 P09_54 Marker 58.1 (cM) Automated name-based View Maps
pAR06F11 Marker 2.7 Cotton - HDC - 1 pAR06F11 Marker 22.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 pAR06F11 Marker Cotton 62,279,659 - 62,279,939 (bp) Automated name-based View Maps