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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-PK
(Reference Set)
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Correspondences
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Maps c6
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c6
Map Start: 0 cM
Map Stop: 126.8 cM
Features by Type:
70 Marker
20 QTL
90 Total

Map Features

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Items 1 to 25 of 90.       of 4 | Next
Cotton - PK - c6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
A1550 Marker 23.6 Cotton - HDC - 6 A1550 Marker 111 (cM) Automated name-based View Maps
Cotton - HDC - 25 A1550 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 A1550 Marker Cotton 5,910,569 - 5,910,825 (bp) Automated name-based View Maps
Cotton - PK - c25 A1550 Marker 77.5 (cM) Automated name-based View Maps
A1599 Marker 114 Cotton - HDC - 6 A1599 Marker 12.7 (cM) Automated name-based View Maps
A1742 Marker 58 Cotton - PK - c25 A1742 Marker 96.5 (cM) Automated name-based View Maps
Cotton - HDC - 6 A1742 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 A1742 Marker Cotton 29,847,469 - 29,848,796 (bp) Automated name-based View Maps
Cotton - HDC - 25 A1742 Marker 77.9 (cM) Automated name-based View Maps
BNL1153 Marker 49.3 Cotton - HDC - 6 BNL1153 Marker 93.9 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1153 Marker 80.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1153 Marker 79.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1153 Marker 69.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1153 Marker 90 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1153 Marker 50.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1153 Marker 74 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1153 Marker 88.1 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1153 Marker 79.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1153 Marker Cotton 19,375,282 - 19,375,657 (bp) Automated name-based View Maps
Coau1I01 Marker 42.7 Cotton - Graimondii_physical - Gr_Chr10 Coau1I01 Marker Cotton 15,611,993 - 15,612,679 (bp) Automated name-based View Maps
Cotton - HDC - 6 Coau1I01 Marker 98.3 (cM) Automated name-based View Maps
Coau2A23 Marker 55.3 Cotton - HDC - 6 Coau2A23 Marker 89.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Coau2A23 Marker Cotton 34,081,339 - 34,082,169 (bp) Automated name-based View Maps
Coau3L05 Marker 80.3 Cotton - PK - c25 Coau3L05 Marker 116.2 (cM) Automated name-based View Maps
Cotton - HDC - 6 Coau3L05 Marker 46.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Coau3L05 Marker Cotton 57,711,064 - 57,711,720 (bp) Automated name-based View Maps
Cotton - HDC - 25 Coau3L05 Marker 39.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 Coau3L05 Marker 11.6 (cM) Automated name-based View Maps
Cotton - PK - c23 coau3L05 Marker 11.7 (cM) Automated name-based View Maps
Coau4J19 Marker 58.9 Cotton - HDC - 6 Coau4J19 Marker 86.2 (cM) Automated name-based View Maps
G1273 Marker 8.3 Cotton - Graimondii_physical - Gr_Chr10 G1273 Marker Cotton 2,253,343 - 2,253,911 (bp) Automated name-based View Maps
Cotton - HDC - 6 G1273 Marker 121.1 (cM) Automated name-based View Maps
Gate1AA08 Marker 126.7 Cotton - HDC - 6 Gate1AA08 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 17 Gate1AA08 Marker 77.4 (cM) Automated name-based View Maps
Cotton - PK - c17 Gate1AA08 Marker 51.7 (cM) Automated name-based View Maps
Gate1BA09 Marker 55.3 Cotton - HDC - 6 Gate1BA09 Marker 89.9 (cM) Automated name-based View Maps
Gate1DD01 Marker 59.8 Cotton - HDC - 6 Gate1DD01 Marker 84.4 (cM) Automated name-based View Maps
Cotton - PK - c25 Gate1DD01 Marker 112.7 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gate1DD01 Marker 49.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate1DD01 Marker Cotton 54,468,044 - 54,468,734 (bp) Automated name-based View Maps
Gate3AH06 Marker 30.7 Cotton - Graimondii_physical - Gr_Chr03 Gate3AH06 Marker Cotton 22,761,238 - 22,761,692 (bp) Automated name-based View Maps
Cotton - HDC - 6 Gate3AH06 Marker 106.2 (cM) Automated name-based View Maps
Gate3BF02 Marker 107.4 Cotton - PK - c12 Gate3BF02 Marker 203.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 Gate3BF02 Marker 18.5 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate3BF02 Marker 19.3 (cM) Automated name-based View Maps
Gate4BB01 Marker 20.2 Cotton - PK - A03 Gate4BB01 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate4BB01 Marker 113.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gate4BB01 Marker 123.6 (cM) Automated name-based View Maps
Cotton - PK - c25 Gate4BB01 Marker 43.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gate4BB01 Marker Cotton 3,629,234 - 3,629,758 (bp) Automated name-based View Maps
Cotton - HDC - 11 Gate4BB01 Marker 132.9 (cM) Automated name-based View Maps
M16_147 Marker 126.7 Cotton - HDC - 6 M16_147 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 M16_147 Marker 297.3 (cM) Automated name-based View Maps
P12_20 Marker 8.3 Cotton - HDC - 5 P12_20 Marker 83 (cM) Automated name-based View Maps
Cotton - PK - c5 P12_20 Marker 99.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 P12_20 Marker 121.1 (cM) Automated name-based View Maps
PAR01D06 Marker 83.5 Cotton - HDC - 6 pAR01D06 Marker 43.2 (cM) Automated name-based View Maps
PAR09H06 Marker 50.8 Cotton - HDC - 6 pAR09H06 Marker 92.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 pAR09H06 Marker Cotton 20,243,879 - 20,244,135 (bp) Automated name-based View Maps
pAR10H09 Marker 122.2 Cotton - HDC - 6 pAR10H09 Marker 4.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 pAR10H09 Marker Cotton 2,649,640 - 2,650,143 (bp) Automated name-based View Maps
pAR211 Marker 70.6 Cotton - HDC - 6 pAR211 Marker 64.2 (cM) Automated name-based View Maps
PAR3_32 Marker 55.3 Cotton - HDC - 6 pAR03_32 Marker 84.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 pAR3_32 Marker 148 (cM) Automated name-based View Maps
Cotton - GVc - 6 pAR03_32 Marker 66.2 (cM) Automated name-based View Maps
pAR485 Marker 44.5 Cotton - Graimondii_physical - Gr_Chr08 pAR485 Marker Cotton 5,289,566 - 5,290,505 (bp) Automated name-based View Maps
Cotton - HDC - 6 pAR485 Marker 97.1 (cM) Automated name-based View Maps
pAR717 Marker 60.7 Cotton - HDC - 6 pAR717 Marker 82.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 pAR717 Marker 145.8 (cM) Automated name-based View Maps
Cotton - GVc - 6 pAR717 Marker 67.9 (cM) Automated name-based View Maps
pAR783 Marker 58 Cotton - Guazuncho2xVH8-BC1 - c25 pAR783 Marker 106 (cM) Automated name-based View Maps
Cotton - GVc - 25 pAR783 Marker 76.4 (cM) Automated name-based View Maps
Cotton - PK - c25 pAR783 Marker 100.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 pAR783 Marker 77.1 (cM) Automated name-based View Maps
Cotton - HDC - 6 pAR783 Marker 88.1 (cM) Automated name-based View Maps