CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c9
Map Start: 0 cM
Map Stop: 152.5 cM
Features by Type:
95 Marker
8 QTL
103 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 103.       of 5 | Next
Cotton - PK - c9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3582 Marker 73.5 Cotton - HDC - 9 BNL3582 Marker 78.7 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL3582 Marker 85.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3582 Marker Cotton 39,583,184 - 39,583,533 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL3582 Marker 50.16 (cM) Automated name-based View Maps
Cotton - TH - 9 BNL3582 Marker 77.2 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL3582 Marker 67.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL3582 Marker 180.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL3582 Marker 69.9 (cM) Automated name-based View Maps
BNL3948 Marker 40 Cotton - Graimondii_physical - Gr_Chr11 BNL3948 Marker Cotton 21,157,864 - 21,158,296 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3948 Marker 59.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3948 Marker 89.7 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL3948 Marker 99.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL3948 Marker 42.2 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3948 Marker 82.7 (cM) Automated name-based View Maps
Cotton - T3 - 20 BNL3948 Marker 60.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3948 Marker 135.2 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL3948 Marker 58.1 (cM) Automated name-based View Maps
BNL0836 Marker 106.2 Cotton - HDC - 7 BNL0836 Marker 33.6 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL0836 Marker 48.3 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL0836 Marker 145.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL0836 Marker 168.4 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL0836 Marker 55 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL0836 Marker 54.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL0836 Marker Cotton 52,098,871 - 52,099,270 (bp) Automated name-based View Maps
Cotton - PK - c7 BNL0836 Marker 50.2 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL0836 Marker 131.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 BNL0836 Marker 14.95 (cM) Automated name-based View Maps
BNL3031 Marker 46.1 Cotton - GVc - 23 BNL3031 Marker 57.3 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL3031 Marker 111.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 49.6 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL3031 Marker 50.5 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 60.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL3031 Marker 118 (cM) Automated name-based View Maps
Cotton - TH - 23 BNL3031 Marker 69.6 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL3031 Marker 92.69 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL3031 Marker 70.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU15 Marker 82.2 (cM) Automated name-based View Maps
Cotton - TH - 9 BNL3031 Marker 58.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL3031b Marker 36.98 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL3031 Marker 128.8 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL3031 Marker 90.52 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL3031 Marker 58.9 (cM) Automated name-based View Maps
Cotton - PK - c23 BNL3031 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL3031 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL3031a Marker 38.53 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL3031 Marker 117.7 (cM) Automated name-based View Maps
BNL1162 Marker 30.4 Cotton - HDC - 9 BNL1162 Marker 36.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL1162 Marker 31.6 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL1162 Marker 39.4 (cM) Automated name-based View Maps
Cotton - TH - 9 BNL1162 Marker 31.2 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL1162 Marker 148.8 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL1162 Marker 122.36 (cM) Automated name-based View Maps
A1733 Marker 103.3 Cotton - HDC - 9 A1733 Marker 98.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 A1733 Marker Cotton 2,952,728 - 2,953,299 (bp) Automated name-based View Maps
A1744 Marker 75.3 Cotton - HDC - 9 A1744 Marker 83.3 (cM) Automated name-based View Maps
Unig27G12 Marker 26.8 Cotton - HDC - 9 Unig27G12 Marker 22.9 (cM) Automated name-based View Maps
A1471 Marker 74.4 Cotton - GVc - 9 A1471 Marker 71.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 A1471 Marker 82.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 A1471 Marker 164.8 (cM) Automated name-based View Maps
Cotton - PK - c23 A1471 Marker 111.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 A1471 Marker 190.6 (cM) Automated name-based View Maps
Cotton - HDC - 23 A1471 Marker 111.3 (cM) Automated name-based View Maps
Cotton - GVc - 23 A1471 Marker 87.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 A1471 Marker Cotton 41,046,508 - 41,047,005 (bp) Automated name-based View Maps
Unig26B08 Marker 144.7 Cotton - HDC - 9 Unig26B08 Marker 126.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Unig26B08 Marker Cotton 40,437,400 - 40,438,040 (bp) Automated name-based View Maps
Unig27B04 Marker 101.1 Cotton - Graimondii_physical - Gr_Chr06 Unig27B04 Marker Cotton 44,954,608 - 44,955,271 (bp) Automated name-based View Maps
Cotton - HDC - 9 Unig27B04 Marker 96.4 (cM) Automated name-based View Maps
Unig25A09 Marker 91.1 Cotton - HDC - 9 Unig25A09 Marker 89.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 Unig25A09 Marker Cotton 43,345,916 - 43,346,563 (bp) Automated name-based View Maps
Unig23E08 Marker 73.5 Cotton - Graimondii_physical - Gr_Chr03 Unig23E08 Marker Cotton 28,768,895 - 28,769,539 (bp) Automated name-based View Maps
Cotton - HDC - 9 Unig23E08 Marker 78.7 (cM) Automated name-based View Maps
Gate1AD03 Marker 3.4 Cotton - HDC - 9 Gate1AD03 Marker 18.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Gate1AD03 Marker Cotton 3,529,440 - 3,529,903 (bp) Automated name-based View Maps
Gate1CF01 Marker 124.6 Cotton - PK - c6 Gate1CF01 Marker 42.7 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate1CF01 Marker 98.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate1CF01 Marker 113 (cM) Automated name-based View Maps
Gate2BE06 Marker 90 Cotton - HDC - 9 Gate2BE06 Marker 89.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate2BE06 Marker Cotton 26,242,759 - 26,243,442 (bp) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 119.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 123.5 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate2BE06 Marker 120.4 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate2BE06 Marker 124.7 (cM) Automated name-based View Maps
Gate2CA02 Marker 146.8 Cotton - HDC - 9 Gate2CA02 Marker 128.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 Gate2CA02 Marker 28.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gate2CA02 Marker Cotton 60,956,812 - 60,957,544 (bp) Automated name-based View Maps
Cotton - PK - D03 Gate2CA02 Marker 15.9 (cM) Automated name-based View Maps
Gate3BE02 Marker 26.8 Cotton - HDC - 9 Gate3BE02 Marker 22.9 (cM) Automated name-based View Maps
Gate3CF09 Marker 119.7 Cotton - PK - c23 Gate3CF09 Marker 141.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate3CF09 Marker 140.1 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate3CF09 Marker 109.7 (cM) Automated name-based View Maps
Gate4AD03 Marker 74.4 Cotton - HDC - 9 Gate4AD03 Marker 82.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gate4AD03 Marker Cotton 60,726,663 - 60,727,448 (bp) Automated name-based View Maps
Gate4DF03 Marker 49.8 Cotton - PK - c12 Gate4DF03 Marker 154.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Gate4DF03 Marker Cotton 2,671,583 - 2,671,868 (bp) Automated name-based View Maps
Cotton - HDC - 9 Gate4DF03 Marker 62.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 Gate4DF03 Marker 41.4 (cM) Automated name-based View Maps
P02_27 Marker 145.8 Cotton - HDC - 9 P02_27 Marker 127.5 (cM) Automated name-based View Maps
P08_36 Marker 33.9 Cotton - HDC - 9 P08_36 Marker 23.9 (cM) Automated name-based View Maps
P12_12 Marker 33.9 Cotton - HDC - 9 P12_12 Marker 23.9 (cM) Automated name-based View Maps
Cotton - PK - c23 P12_12 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 P12_12 Marker 72.4 (cM) Automated name-based View Maps
pAR068 Marker 33.9 Cotton - HDC - 9 pAR068 Marker 23.9 (cM) Automated name-based View Maps