CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-PK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - PK [ View Map Set Info ]
Map Name: c9
Map Start: 0 cM
Map Stop: 152.5 cM
Features by Type:
95 Marker
8 QTL
103 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 103.       of 5 | Next
Cotton - PK - c9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gate1AD03 Marker 3.4 Cotton - HDC - 9 Gate1AD03 Marker 18.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Gate1AD03 Marker Cotton 3,529,440 - 3,529,903 (bp) Automated name-based View Maps
Gate1CF01 Marker 124.6 Cotton - HDC - 9 Gate1CF01 Marker 113 (cM) Automated name-based View Maps
Cotton - HDC - 6 Gate1CF01 Marker 98.3 (cM) Automated name-based View Maps
Cotton - PK - c6 Gate1CF01 Marker 42.7 (cM) Automated name-based View Maps
Gate2BE06 Marker 90 Cotton - PK - c23 Gate2BE06 Marker 120.4 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 119.4 (cM) Automated name-based View Maps
Cotton - PK - c23 Gate2BE06 Marker 124.7 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate2BE06 Marker 123.5 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate2BE06 Marker 89.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gate2BE06 Marker Cotton 26,242,759 - 26,243,442 (bp) Automated name-based View Maps
Gate2CA02 Marker 146.8 Cotton - HDC - 9 Gate2CA02 Marker 128.2 (cM) Automated name-based View Maps
Cotton - PK - D03 Gate2CA02 Marker 15.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gate2CA02 Marker Cotton 60,956,812 - 60,957,544 (bp) Automated name-based View Maps
Cotton - HDC - 24 Gate2CA02 Marker 28.3 (cM) Automated name-based View Maps
Gate3BE02 Marker 26.8 Cotton - HDC - 9 Gate3BE02 Marker 22.9 (cM) Automated name-based View Maps
Gate3CF09 Marker 119.7 Cotton - PK - c23 Gate3CF09 Marker 141.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 Gate3CF09 Marker 140.1 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate3CF09 Marker 109.7 (cM) Automated name-based View Maps
Gate4AD03 Marker 74.4 Cotton - Graimondii_physical - Gr_Chr02 Gate4AD03 Marker Cotton 60,726,663 - 60,727,448 (bp) Automated name-based View Maps
Cotton - HDC - 9 Gate4AD03 Marker 82.9 (cM) Automated name-based View Maps
Gate4DF03 Marker 49.8 Cotton - Graimondii_physical - Gr_Chr08 Gate4DF03 Marker Cotton 2,671,583 - 2,671,868 (bp) Automated name-based View Maps
Cotton - HDC - 12 Gate4DF03 Marker 41.4 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gate4DF03 Marker 62.9 (cM) Automated name-based View Maps
Cotton - PK - c12 Gate4DF03 Marker 154.6 (cM) Automated name-based View Maps
P02_27 Marker 145.8 Cotton - HDC - 9 P02_27 Marker 127.5 (cM) Automated name-based View Maps
P08_36 Marker 33.9 Cotton - HDC - 9 P08_36 Marker 23.9 (cM) Automated name-based View Maps
P12_12 Marker 33.9 Cotton - HDC - 9 P12_12 Marker 23.9 (cM) Automated name-based View Maps
Cotton - PK - c23 P12_12 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 P12_12 Marker 72.4 (cM) Automated name-based View Maps
pAR068 Marker 33.9 Cotton - HDC - 9 pAR068 Marker 23.9 (cM) Automated name-based View Maps
PAR07C05 Marker 118.3 Cotton - HDC - 9 pAR07C05 Marker 108.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR07C05 Marker Cotton 47,036,580 - 47,037,256 (bp) Automated name-based View Maps
pAR085 Marker 52.6 Cotton - HDC - 9 pAR085 Marker 64.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR085 Marker Cotton 36,925,775 - 36,926,108 (bp) Automated name-based View Maps
pAR117 Marker 51.7 Cotton - HDC - 9 pAR117 Marker 64.1 (cM) Automated name-based View Maps
pAR144 Marker 146.7 Cotton - HDC - 9 pAR144 Marker 23.9 (cM) Automated name-based View Maps
Cotton - HDC - 26 pAR144 Marker 60 (cM) Automated name-based View Maps
Cotton - PK - D02 pAR144 Marker 166.9 (cM) Automated name-based View Maps
Cotton - PK - c26 pAR144 Marker 117.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 pAR144 Marker Cotton 36,335,971 - 36,336,504 (bp) Automated name-based View Maps
Cotton - HDC - 10 pAR144 Marker 49.3 (cM) Automated name-based View Maps
Cotton - PK - c22 pAR144 Marker 47.6 (cM) Automated name-based View Maps
Cotton - GVc - 9 pAR144 Marker 17.2 (cM) Automated name-based View Maps
Cotton - PK - c10 pAR144 Marker 137.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 pAR144 Marker 64.4 (cM) Automated name-based View Maps
Cotton - HDC - 21 pAR144 Marker 69.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 pAR144 Marker 128.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 pAR144 Marker 45.6 (cM) Automated name-based View Maps
pAR288 Marker 0 Cotton - HDC - 9 pAR288 Marker 15.4 (cM) Automated name-based View Maps
Cotton - PK - c14 pAR288 Marker 136.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 pAR288 Marker 23.6 (cM) Automated name-based View Maps
pAR341 Marker 67 Cotton - HDC - 9 pAR341 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR341 Marker Cotton 38,120,223 - 38,120,484 (bp) Automated name-based View Maps
pAR804 Marker 143.2 Cotton - Graimondii_physical - Gr_Chr06 pAR804 Marker Cotton 49,354,671 - 49,355,475 (bp) Automated name-based View Maps
Cotton - HDC - 9 pAR804 Marker 125.7 (cM) Automated name-based View Maps
pAR873 Marker 125.7 Cotton - HDC - 9 pAR873 Marker 113.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pAR873 Marker Cotton 47,692,919 - 47,693,650 (bp) Automated name-based View Maps
pARC_15 Marker 94.7 Cotton - HDC - 9 pARC_15 Marker 91.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pARC_15 Marker Cotton 44,013,710 - 44,014,181 (bp) Automated name-based View Maps
pGH502 Marker 78.8 Cotton - HDC - 9 pGH502 Marker 84.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 pGH502 Marker Cotton 42,500,623 - 42,501,474 (bp) Automated name-based View Maps
pGH783 Marker 79.9 Cotton - Graimondii_physical - Gr_Chr06 pGH783 Marker Cotton 42,603,421 - 42,604,202 (bp) Automated name-based View Maps
Cotton - PK - c23 pGH783 Marker 111.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 pGH783 Marker 111.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 pGH783 Marker 85.2 (cM) Automated name-based View Maps
PXP1_48 Marker 39.1 Cotton - HDC - 9 pXP1_48 Marker 39.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 PXP1_48 Marker Cotton 33,128,404 - 33,128,686 (bp) Automated name-based View Maps
PXP4_06 Marker 74.4 Cotton - Graimondii_physical - Gr_Chr06 PXP4_06 Marker Cotton 40,391,414 - 40,391,820 (bp) Automated name-based View Maps
Cotton - HDC - 9 pXP4_06 Marker 82.9 (cM) Automated name-based View Maps