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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthethic_map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthethic_map [ View Map Set Info ]
Map Name: 10
Map Start: 0 bp
Map Stop: 23.21 bp
Features by Type:
110 Marker
21 QTL
131 Total

Map Features

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Items 1 to 25 of 131.       of 6 | Next
Rice - Synthethic_map - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
B082E Marker 0.483 - 0.488 Maize - Physical_map_IBM2 - 1 B082E Marker 111.93 (bp) Automated name-based, Automated name-based View Maps
B101E Marker 18.533 - 18.539 Maize - Physical_map_IBM2 - 5 B101E Marker 26 - 26.01 (bp) Automated name-based, Automated name-based View Maps
B116E Marker 22.862 - 22.876 Maize - Physical_map_IBM2 - 1 B116E Marker 98.34 - 98.36 (bp) Automated name-based, Automated name-based View Maps
OsCSLD1 Marker 23.062 - 23.066 No other positions
B094B Marker 14.32 - 14.323 Maize - Physical_map_IBM2 - 5 B094B Marker 34.56 (bp) Automated name-based, Automated name-based View Maps
B110B Marker 20.715 Maize - Physical_map_IBM2 - 9 B110B Marker 125.22 (bp) Automated name-based, Automated name-based View Maps
RM596 Marker 15.209 No other positions
B084B Marker 0.689 - 0.696 Maize - Physical_map_IBM2 - 1 B084B Marker 112.61 - 112.62 (bp) Automated name-based, Automated name-based View Maps
B100E Marker 18.553 - 18.559 Maize - Physical_map_IBM2 - 1 B100E Marker 229.13 (bp) Automated name-based, Automated name-based View Maps
B118B Marker 22.911 - 22.916 Maize - Physical_map_IBM2 - 1 B118B Marker 100.91 - 100.92 (bp) Automated name-based, Automated name-based View Maps
C701 Marker 0.866 No other positions
B093E Marker 14.641 - 14.643 Maize - Physical_map_IBM2 - 1 B093E Marker 240.92 - 240.93 (bp) Automated name-based, Automated name-based View Maps
B111B Marker 21.049 - 21.052 Maize - Physical_map_IBM2 - 9 B111B Marker 126.12 (bp) Automated name-based, Automated name-based View Maps
RZ625 Marker 16.62 No other positions
B085B Marker 3.659 - 3.662 Maize - Physical_map_IBM2 - 1 B085B Marker 121.81 (bp) Automated name-based, Automated name-based View Maps
B104B Marker 18.755 - 18.758 Maize - Physical_map_IBM2 - 5 B104B Marker 25.64 (bp) Automated name-based, Automated name-based View Maps
B119E Marker 23.149 - 23.153 Maize - Physical_map_IBM2 - 5 B119E Marker 45.57 (bp) Automated name-based, Automated name-based View Maps
RM222 Marker 2.619 No other positions
B095E Marker 14.985 Maize - Physical_map_IBM2 - 1 B095E Marker 240.55 (bp) Automated name-based, Automated name-based View Maps
B112B Marker 21.35 - 21.359 Maize - Physical_map_IBM2 - 9 B112B Marker 118.53 - 118.55 (bp) Automated name-based, Automated name-based View Maps
RM258 Marker 18.014 No other positions
B087B Marker 10.837 Maize - Physical_map_IBM2 - 1 B087B Marker 130.75 - 130.76 (bp) Automated name-based, Automated name-based View Maps
B104E Marker 19.346 - 19.348 Maize - Physical_map_IBM2 - 5 B104E Marker 23.78 - 23.79 (bp) Automated name-based, Automated name-based View Maps
RM2125 Marker 4.909 No other positions
B097B Marker 15.63 - 15.636 Maize - Physical_map_IBM2 - 5 B097B Marker 33.09 - 33.1 (bp) Automated name-based, Automated name-based View Maps