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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 11
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 11
Map Start: 0 cM
Map Stop: 166.54 cM
Features by Type:
138 Marker
138 Total

Map Features

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Items 1 to 25 of 138.       of 6 | Next
Cotton - T3 - 11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Gh470 Marker 18.87 Cotton - HDC - 11 CLU369 Marker 32.7 (cM) Automated name-based View Maps
Cotton - E3 - 21 Gh470 Marker 211.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU369 Marker 61.8 (cM) Automated name-based View Maps
BNL3592 Marker 112.41 Cotton - CH - 11 BNL3592 Marker 126.7 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL3592 Marker 71.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL3592 Marker 86.7 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3592 Marker 73.4 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL3592 Marker 84.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL3592 Marker 149.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 BNL3592 Marker Cotton 43,820,900 - 43,821,383 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 BNL3592 Marker 27.02 (cM) Automated name-based View Maps
BNL3442 Marker 21.43 Cotton - TH - 11 BNL3442 Marker 147.3 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL3442 Marker 210 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL3442 Marker 145.7 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL3442 Marker 179.1 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL3442 Marker 15.4 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL3442 Marker 205.6 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU36 Marker 35.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL3442 Marker 217 (cM) Automated name-based View Maps
TMB0426 Marker 113.52 Cotton - T3 - 21 TMB0426 Marker 92 (cM) Automated name-based View Maps
Cotton - HDC - 11 TMB0426 Marker 150.7 (cM) Automated name-based View Maps
Cotton - HDC - 21 TMB0426 Marker 124.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 TMB0426 Marker 143.5 (cM) Automated name-based View Maps
UCcg10563_649 Marker 23.58 Cotton - Graimondii_physical - Gr_Chr07 UCcg10563_649 Marker Cotton 4,241,693 - 4,241,795 (bp) Automated name-based View Maps
Cotton - HDC - 11 UCcg10563_649 Marker 37.9 (cM) Automated name-based View Maps
MUSB1252 Marker 114.17 Cotton - HDC - 11 MUSB1252 Marker 151.3 (cM) Automated name-based View Maps
UCcg10797_372 Marker 23.82 Cotton - HDC - 11 UCcg10797_372 Marker 38.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 UCcg10797_372 Marker Cotton 4,362,091 - 4,362,193 (bp) Automated name-based View Maps
MUSB0827 Marker 115.37 Cotton - Graimondii_physical - Gr_Chr10 MUSB0827 Marker Cotton 37,406,029 - 37,406,886 (bp) Automated name-based View Maps
Cotton - E3 - 11 MUSB0827 Marker 80.4 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB0827 Marker 152.5 (cM) Automated name-based View Maps
DOW052 Marker 27.35 Cotton - Graimondii_physical - Gr_Chr07 DOW052 Marker Cotton 5,409,593 - 5,409,849 (bp) Automated name-based View Maps
Cotton - HDC - 11 DOW052 Marker 42.6 (cM) Automated name-based View Maps
DPL0325 Marker 116.37 Cotton - E3 - 11 DPL0325 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU182 Marker 153.5 (cM) Automated name-based View Maps
MUCS028 Marker 28.7 Cotton - HDC - 11 CLU2716 Marker 44.2 (cM) Automated name-based View Maps
DOW004 Marker 116.84 Cotton - HDC - 11 DOW004 Marker 153.9 (cM) Automated name-based View Maps
MUSS332 Marker 29.37 Cotton - E3 - 11 MUSS332 Marker 184.9 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU2716 Marker 44.2 (cM) Automated name-based View Maps
MUSB1035 Marker 118.68 Cotton - Guazuncho2xVH8-RIL - c14 MUSB1035s Marker 53.47 (cM) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 30.1 (cM) Automated name-based View Maps
Cotton - GVc - 19 MUSB1035 Marker 149.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 MUSB1035z Marker 44.25 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 MUSB1035t Marker 38.27 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB1035 Marker 155.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSB1035y Marker 55.43 (cM) Automated name-based View Maps
Cotton - HDC - 12 MUSB1035 Marker 43.9 (cM) Automated name-based View Maps
Cotton - GVc - 5 MUSB1035 Marker 92.2 (cM) Automated name-based View Maps
Cotton - GVc - 12 MUSB1035 Marker 102.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 MUSB1035v Marker 76.27 (cM) Automated name-based View Maps
Cotton - GVc - 14 MUSB1035 Marker 57.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 MUSB1035 Marker 77.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 MUSB1035 Marker 73 (cM) Automated name-based View Maps
Cotton - T3 - 5 MUSB1035 Marker 141.68 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB1035 Marker Cotton 32,261,219 - 32,262,407 (bp) Automated name-based View Maps
Cotton - HDC - 19 MUSB1035 Marker 51.4 (cM) Automated name-based View Maps
Cotton - GVc - 25 MUSB1035 Marker 80.6 (cM) Automated name-based View Maps
Cotton - T3 - 5 MUSB1035 Marker 148.61 (cM) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 49.1 (cM) Automated name-based View Maps
STV069 Marker 30.5 Cotton - E3 - 11 STV069 Marker 190.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU1057 Marker 46.5 (cM) Automated name-based View Maps
Cotton - HDC - 21 CLU1057 Marker 70.9 (cM) Automated name-based View Maps
Cotton - T3 - 21 STV069 Marker 42.02 (cM) Automated name-based View Maps
MUCS399 Marker 120.08 Cotton - HDC - 2 CLU1851 Marker 63.9 (cM) Automated name-based View Maps
Cotton - CH - 21 MUCS399 Marker 194.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUCS399a Marker 34.52 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUCS399 Marker 42.7 (cM) Automated name-based View Maps
Cotton - GVc - 11 MUCS399 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 MUCS399b Marker 31.27 (cM) Automated name-based View Maps
Cotton - CH - 11 MUCS399 Marker 144.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU1851 Marker 144.5 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU1851 Marker 141.9 (cM) Automated name-based View Maps
UCcot10240_147 Marker 31.15 Cotton - Graimondii_physical - Gr_Chr07 UCcot10240_147 Marker Cotton 5,253,512 - 5,253,614 (bp) Automated name-based View Maps
Cotton - HDC - 11 UCcot10240_147 Marker 47.3 (cM) Automated name-based View Maps
JESPR008 Marker 124.01 Cotton - TH - 11 JESPR008 Marker 65.3 (cM) Automated name-based View Maps
Cotton - HDC - 11 JESPR008 Marker 160.8 (cM) Automated name-based View Maps
BNL1034 Marker 31.81 Cotton - HDC - 21 BNL1034 Marker 72.6 (cM) Automated name-based View Maps
Cotton - PK - A03 BNL1034 Marker 164.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL1034 Marker 203.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - A03 BNL1034 Marker 123.7 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL1034 Marker 43.27 (cM) Automated name-based View Maps
Cotton - TH - 21 BNL1034 Marker 137.4 (cM) Automated name-based View Maps
Cotton - CH - 11 BNL1034 Marker 31.3 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL1034 Marker 37.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL1034 Marker 91.6 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL1034 Marker 195.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 BNL1034b Marker 126.68 (cM) Automated name-based View Maps
Cotton - E3 - 11 BNL1034 Marker 184.6 (cM) Automated name-based View Maps
Cotton - HDC - 11 BNL1034 Marker 48 (cM) Automated name-based View Maps
DOW087 Marker 124.58 Cotton - HDC - 11 DOW087 Marker 161.4 (cM) Automated name-based View Maps
DPL0472 Marker 34.69 Cotton - E3 - 11 DPL0472 Marker 180.7 (cM) Automated name-based View Maps
Cotton - HDC - 11 CLU185 Marker 52.5 (cM) Automated name-based View Maps
UCcg11312_353 Marker 125.72 Cotton - HDC - 11 UCcg11312_353 Marker 162.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 UCcg11312_353 Marker Cotton 50,685,067 - 50,685,169 (bp) Automated name-based View Maps
UCcgs10033_191 Marker 36.99 Cotton - HDC - 11 UCcgs10033_191 Marker 55.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 UCcgs10033_191 Marker Cotton 6,232,656 - 6,232,758 (bp) Automated name-based View Maps
DPL0270 Marker 125.94 Cotton - Graimondii_physical - Gr_Chr07 DPL0270 Marker Cotton 50,681,564 - 50,682,218 (bp) Automated name-based View Maps
Cotton - E3 - 11 DPL0270 Marker 68 (cM) Automated name-based View Maps
Cotton - HDC - 11 DPL0270 Marker 162.7 (cM) Automated name-based View Maps
UCcg10305_112 Marker 37.18 Cotton - HDC - 11 UCcg10305_112 Marker 56.2 (cM) Automated name-based View Maps