CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 14
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 14
Map Start: 0 cM
Map Stop: 126.42 cM
Features by Type:
80 Marker
80 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 80.       of 4 | Next
Cotton - T3 - 14
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR246 Marker 119.19 Cotton - HDC - 14 CIR246 Marker 121.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR246 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 14 CIR246 Marker 114.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR246 Marker 0 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR246 Marker Cotton 978,967 - 979,469 (bp) Automated name-based View Maps
Cotton - GVc - 14 CIR246 Marker 0 (cM) Automated name-based View Maps
TMB0071 Marker 120.14 Cotton - Graimondii_physical - Gr_Chr05 TMB0071 Marker Cotton 1,245,637 - 1,246,246 (bp) Automated name-based View Maps
Cotton - E3 - 14 TMB0071 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 TMB0071 Marker 122.4 (cM) Automated name-based View Maps
DPL0538 Marker 120.48 Cotton - HDC - 14 DPL0538 Marker 122.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DPL0538 Marker Cotton 5,383,316 - 5,383,952 (bp) Automated name-based View Maps
HAU0008 Marker 120.79 Cotton - HDC - 14 HAU0008 Marker 123.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 HAU0008 Marker Cotton 1,346,418 - 1,347,538 (bp) Automated name-based View Maps
JESPR156 Marker 121.34 Cotton - E3 - 14 JESPR156 Marker 96.5 (cM) Automated name-based View Maps
Cotton - TH - 14 JESPR156 Marker 104.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 JESPR156 Marker Cotton 1,639,474 - 1,640,145 (bp) Automated name-based View Maps
Cotton - HDC - 14 JESPR156 Marker 126.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR156 Marker 112.25 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR156 Marker 106.4 (cM) Automated name-based View Maps
BNL3644 Marker 122.54 Cotton - Graimondii_physical - Gr_Chr05 BNL3644 Marker Cotton 1,275,036 - 1,275,397 (bp) Automated name-based View Maps
Cotton - TH - 14 BNL3644 Marker 111.7 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3644 Marker 124.8 (cM) Automated name-based View Maps
JESPR156 Marker 124.11 Cotton - Graimondii_physical - Gr_Chr05 JESPR156 Marker Cotton 1,639,474 - 1,640,145 (bp) Automated name-based View Maps
Cotton - HDC - 14 JESPR156 Marker 126.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR156 Marker 112.25 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR156 Marker 106.4 (cM) Automated name-based View Maps
Cotton - E3 - 14 JESPR156 Marker 96.5 (cM) Automated name-based View Maps
Cotton - TH - 14 JESPR156 Marker 104.9 (cM) Automated name-based View Maps
BNL1403 Marker 126.42 Cotton - T3 - 13 BNL1403 Marker 7.17 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL1403 Marker 90.54 (cM) Automated name-based View Maps
Cotton - HDC - 21 BNL1403 Marker 122.8 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL1403 Marker 128.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL1403 Marker 7.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL1403 Marker 99.4 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL1403 Marker 108.23 (cM) Automated name-based View Maps
NAU0895 Marker 0 Cotton - TH - 2 NAU0895 Marker 111.2 (cM) Automated name-based View Maps
Cotton - T3 - 2 NAU0895 Marker 3.67 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU0895 Marker 8.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU0895 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU0895 Marker 98.9 (cM) Automated name-based View Maps
NAU2265 Marker 0.32 Cotton - HDC - 2 CLU3518 Marker 8.5 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU2265 Marker 99.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU3518 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 2 NAU2265 Marker 3.67 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 NAU2265 Marker 74.95 (cM) Automated name-based View Maps
CIR202 Marker 2.54 Cotton - Guazuncho2xVH8-RIL - c14 CIR202c Marker 92.41 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR202 Marker 116.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR202b Marker 72.07 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR202 Marker 19.6 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR202 Marker 154.4 (cM) Automated name-based View Maps
Cotton - CH - 3 CIR202 Marker 133.2 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR202 Marker 82.9 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR202 Marker 111.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR202 Marker Cotton 63,174,006 - 63,174,290 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR202 Marker 152.2 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR202 Marker 48.6 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR202 Marker 7.5 (cM) Automated name-based View Maps
DPL0510 Marker 2.76 Cotton - HDC - 14 DPL0510 Marker 2.8 (cM) Automated name-based View Maps
BNL0834 Marker 6.75 Cotton - CH - 17 BNL0834 Marker 148 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0834 Marker 6.8 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL0834 Marker 127.4 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL0834 Marker 111.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL834 Marker 136.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL0834 Marker 26.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL834 Marker 91.4 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL0834 Marker 70.6 (cM) Automated name-based View Maps
BNL3932 Marker 11.41 Cotton - GVc - 14 BNL3932 Marker 124.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU49 Marker 12.1 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3932 Marker 187.5 (cM) Automated name-based View Maps
Cotton - PK - c14 BNL3932 Marker 160.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL3932 Marker 180.9 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL3932 Marker 40.2 (cM) Automated name-based View Maps
TMB0836 Marker 11.68 Cotton - HDC - 14 TMB0836 Marker 11.7 (cM) Automated name-based View Maps
Cotton - HDC - 3 TMB0836 Marker 12.2 (cM) Automated name-based View Maps
Cotton - T3 - 3 TMB0836 Marker 3.23 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 TMB0836 Marker Cotton 3,869,153 - 3,869,742 (bp) Automated name-based View Maps
TMB1393 Marker 11.7 Cotton - HDC - 14 TMB1393 Marker 11.7 (cM) Automated name-based View Maps
Cotton - E3 - 14 TMB1393 Marker 44.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 TMB1393 Marker Cotton 64,021,005 - 64,021,525 (bp) Automated name-based View Maps
DPL0473 Marker 12 Cotton - HDC - 14 DPL0473 Marker 12 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DPL0473 Marker Cotton 63,837,270 - 63,837,631 (bp) Automated name-based View Maps
TMB0135 Marker 13.1 Cotton - Graimondii_physical - Gr_Chr10 TMB0135 Marker Cotton 28,406,693 - 28,407,367 (bp) Automated name-based View Maps
Cotton - HDC - 14 TMB0135 Marker 13.1 (cM) Automated name-based View Maps
CIR292 Marker 13.38 Cotton - Guazuncho2xVH8-BC1 - c14 CIR292 Marker 179.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR292 Marker 125 (cM) Automated name-based View Maps
Cotton - CH - 14 CIR292 Marker 191.2 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR292 Marker 13.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR292 Marker 14.1 (cM) Automated name-based View Maps
Cotton - CH - 14 CIR292 Marker 201 (cM) Automated name-based View Maps
CIR228 Marker 17.81 Cotton - T3 - 3 CIR228 Marker 10.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR228 Marker 167.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 CIR228a Marker 76.65 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR228 Marker 102.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR228 Marker 20.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR228 Marker 21 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR228 Marker 107 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR228 Marker Cotton 62,635,964 - 62,636,211 (bp) Automated name-based View Maps
Cotton - CH - 3 CIR228 Marker 79.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR228 Marker 137.3 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR228 Marker 153.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR228b Marker 88.01 (cM) Automated name-based View Maps
CIR084 Marker 19.33 Cotton - Guazuncho2xVH8-BC1 - c3 CIR084 Marker 128 (cM) Automated name-based View Maps
Cotton - CH - 14 CIR084 Marker 159.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR084a Marker 86.53 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR084 Marker 160.6 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR084 Marker 24.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR084 Marker 104.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR084 Marker 23 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR084 Marker Cotton 62,421,655 - 62,421,848 (bp) Automated name-based View Maps
Cotton - GVc - 3 CIR084 Marker 98.1 (cM) Automated name-based View Maps
JESPR231 Marker 22.13 Cotton - Guazuncho2xVH8-BC1 - c3 JESPR231 Marker 134.3 (cM) Automated name-based View Maps
Cotton - TH - 3 JESPR231 Marker 57.7 (cM) Automated name-based View Maps
Cotton - CH - 14 JESPR231 Marker 175.2 (cM) Automated name-based View Maps
Cotton - HDC - 14 JESPR231 Marker 25.1 (cM) Automated name-based View Maps
Cotton - HDC - 3 JESPR231 Marker 22.9 (cM) Automated name-based View Maps
Cotton - T3 - 3 JESPR231 Marker 15.99 (cM) Automated name-based View Maps
Cotton - CH - 3 JESPR231 Marker 88.5 (cM) Automated name-based View Maps
Cotton - GVc - 3 JESPR231 Marker 100.7 (cM) Automated name-based View Maps
Cotton - E3 - 3 JESPR231 Marker 143.2 (cM) Automated name-based View Maps
Cotton - CH - 14 JESPR231 Marker 175.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 JESPR231 Marker 104.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 JESPR231 Marker 160.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 JESPR231 Marker 24.9 (cM) Automated name-based View Maps
BNL3259 Marker 29.37 Cotton - Guazuncho2xVH8-RIL - c3 BNL3259a Marker 61.12 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3259 Marker 20.59 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3259 Marker 96.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 BNL3259 Marker 160.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3259 Marker 29.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL3259b Marker 81.01 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3259 Marker 91.2 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL3259 Marker 54.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3259 Marker 109.2 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3259 Marker 167 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3259 Marker 30 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL3259 Marker 136.7 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL3259 Marker 99.6 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3259 Marker 73.3 (cM) Automated name-based View Maps
NAU2312 Marker 37.61 Cotton - E3 - 14 NAU2312 Marker 20.6 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU2312 Marker 41.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 CLU3917 Marker 36.4 (cM) Automated name-based View Maps
NAU1070 Marker 44.59 Cotton - HDC - 14 NAU1070 Marker 42.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU1070 Marker 24.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU1070 Marker Cotton 58,987,292 - 58,987,936 (bp) Automated name-based View Maps
Cotton - TH - 3 NAU1070 Marker 27.8 (cM) Automated name-based View Maps
Cotton - HDC - 3 NAU1070 Marker 45.4 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU1070 Marker 15 (cM) Automated name-based View Maps
Cotton - T3 - 3 NAU1070 Marker 35.47 (cM) Automated name-based View Maps