CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 17
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 17
Map Start: 0 cM
Map Stop: 114.6 cM
Features by Type:
43 Marker
43 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 43.       of 2 | Next
Cotton - T3 - 17
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TMB1540 Marker 0 Cotton - HDC - 17 TMB1540 Marker 110.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 TMB1540 Marker 26.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 TMB1540 Marker Cotton 13,793,128 - 13,793,528 (bp) Automated name-based View Maps
DOW075 Marker 3.92 Cotton - Graimondii_physical - Gr_Chr03 DOW075 Marker Cotton 43,444,080 - 43,444,336 (bp) Automated name-based View Maps
Cotton - HDC - 17 DOW075 Marker 106.5 (cM) Automated name-based View Maps
BNL2496 Marker 7.13 Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2496 Marker 11.6 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2496 Marker 11.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
BNL2496 Marker 7.13 Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2496 Marker 11.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2496 Marker 35 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2496 Marker 11.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2496 Marker 103.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2496 Marker 14.8 (cM) Automated name-based View Maps
TMB0874 Marker 8.16 Cotton - Graimondii_physical - Gr_Chr03 TMB0874 Marker Cotton 43,214,655 - 43,215,245 (bp) Automated name-based View Maps
Cotton - HDC - 17 TMB0874 Marker 102.2 (cM) Automated name-based View Maps
CIR347 Marker 13.88 Cotton - Graimondii_physical - Gr_Chr03 CIR347 Marker Cotton 42,298,424 - 42,298,687 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR347 Marker 4 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR347 Marker 5.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR347 Marker 111 (cM) Automated name-based View Maps
Cotton - HDC - 17 CIR347 Marker 96.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 CIR347 Marker 95.5 (cM) Automated name-based View Maps
BNL3408 Marker 14.26 Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3408 Marker 96.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3408 Marker 110.2 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3408 Marker Cotton 42,143,440 - 42,143,677 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
BNL1606 Marker 18.89 Cotton - HDC - 17 BNL1606 Marker 92.1 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL1606 Marker 52.7 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL1606 Marker 35.2 (cM) Automated name-based View Maps
DPL0045 Marker 19.05 Cotton - HDC - 17 DPL0045 Marker 92 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 DPL0045 Marker Cotton 41,095,291 - 41,095,881 (bp) Automated name-based View Maps
Cotton - E3 - 17 DPL0045 Marker 55.4 (cM) Automated name-based View Maps
NAU2150 Marker 29.94 Cotton - HDC - 17 NAU2150 Marker 82.7 (cM) Automated name-based View Maps
DOW091 Marker 33.3 Cotton - HDC - 17 CLU170 Marker 79.7 (cM) Automated name-based View Maps
MUSB0224 Marker 34.97 Cotton - HDC - 17 MUSB0224 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 MUSB0224 Marker Cotton 49,261,552 - 49,262,185 (bp) Automated name-based View Maps
UCD195 Marker 36 Cotton - T3 - 3 UCD195 Marker 85.08 (cM) Automated name-based View Maps
Cotton - HDC - 3 UCD195 Marker 98.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 UCD195 Marker 77.3 (cM) Automated name-based View Maps
UCD277 Marker 36.27 Cotton - HDC - 17 UCD277 Marker 77 (cM) Automated name-based View Maps
Cotton - HDC - 3 UCD277 Marker 98.9 (cM) Automated name-based View Maps
Cotton - T3 - 3 UCD277 Marker 85.2 (cM) Automated name-based View Maps
DPL0529 Marker 36.89 Cotton - Graimondii_physical - Gr_Chr03 DPL0529 Marker Cotton 37,859,078 - 37,859,700 (bp) Automated name-based View Maps
Cotton - HDC - 17 DPL0529 Marker 76.5 (cM) Automated name-based View Maps
BNL3371 Marker 37.91 Cotton - HDC - 17 BNL3371 Marker 75.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3371 Marker Cotton 36,732,141 - 36,732,647 (bp) Automated name-based View Maps
Cotton - TH - 17 BNL3371 Marker 57.6 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3371 Marker 53.3 (cM) Automated name-based View Maps
TMB2069 Marker 38.05 Cotton - Graimondii_physical - Gr_Chr03 TMB2069 Marker Cotton 36,776,700 - 36,777,273 (bp) Automated name-based View Maps
Cotton - T3 - 3 TMB2069 Marker 79.61 (cM) Automated name-based View Maps
Cotton - HDC - 17 TMB2069 Marker 75.5 (cM) Automated name-based View Maps
Cotton - E3 - 3 TMB2069 Marker 89.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 TMB2069 Marker 92.3 (cM) Automated name-based View Maps
UCcg10941_352 Marker 38.86 Cotton - HDC - 17 UCcg10941_352 Marker 74.7 (cM) Automated name-based View Maps
MUSB0964 Marker 39.53 Cotton - HDC - 17 MUSB0964 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 MUSB0964 Marker Cotton 30,936,345 - 30,937,370 (bp) Automated name-based View Maps
DPL0279 Marker 40.56 Cotton - Graimondii_physical - Gr_Chr03 DPL0279 Marker Cotton 32,793,752 - 32,794,164 (bp) Automated name-based View Maps
Cotton - HDC - 17 DPL0279 Marker 73.4 (cM) Automated name-based View Maps
BNL4073 Marker 40.63 Cotton - Graimondii_physical - Gr_Chr03 BNL4073 Marker Cotton 34,512,285 - 34,512,694 (bp) Automated name-based View Maps
Cotton - E3 - 17 BNL4073 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL4073 Marker 73.2 (cM) Automated name-based View Maps
MUCS106 Marker 42.32 Cotton - T3 - 2 MUCS106 Marker 56.99 (cM) Automated name-based View Maps
Cotton - HDC - 17 MUCS106 Marker 71.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUCS106 Marker 62.1 (cM) Automated name-based View Maps
BNL4003 Marker 43.04 Cotton - HDC - 17 CLU35 Marker 71.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU35 Marker 65 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL4003 Marker 67.9 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL4003 Marker 86.2 (cM) Automated name-based View Maps
TMB2939 Marker 43.26 Cotton - HDC - 17 TMB2939 Marker 70.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB2939 Marker Cotton 19,283,355 - 19,284,070 (bp) Automated name-based View Maps
Cotton - E3 - 17 TMB2939 Marker 80.2 (cM) Automated name-based View Maps
BNL3590 Marker 43.39 Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps