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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
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Maps 20
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 20
Map Start: 0 cM
Map Stop: 119.01 cM
Features by Type:
78 Marker
78 Total

Map Features

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Items 1 to 25 of 78.       of 4 | Next
Cotton - T3 - 20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU1208 Marker 89.63 Cotton - HDC - 20 NAU1208 Marker 59.8 (cM) Automated name-based View Maps
UCcot10393_208 Marker 95.06 Cotton - HDC - 20 UCcot10393_208 Marker 50.9 (cM) Automated name-based View Maps
MUSB1304 Marker 97.1 Cotton - Graimondii_physical - Gr_Chr11 MUSB1304 Marker Cotton 57,231,615 - 57,232,380 (bp) Automated name-based View Maps
Cotton - HDC - 20 MUSB1304 Marker 47.8 (cM) Automated name-based View Maps
MUSS271 Marker 99.75 Cotton - HDC - 20 MUSS271 Marker 43.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 MUSS271 Marker Cotton 58,423,524 - 58,424,437 (bp) Automated name-based View Maps
BNL3280 Marker 103.42 Cotton - Guazuncho2xVH8-BC2 - c18 BNL3280 Marker 50.7 (cM) Automated name-based View Maps
Cotton - E3 - 18 BNL3280 Marker 83.3 (cM) Automated name-based View Maps
Cotton - TH - 18 BNL3280 Marker 66.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3280b Marker 89.94 (cM) Automated name-based View Maps
Cotton - HDC - 18 BNL3280 Marker 56.5 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL3280 Marker 66.8 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3280 Marker 107.1 (cM) Automated name-based View Maps
Cotton - GVc - 18 BNL3280 Marker 77.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c18 BNL3280a Marker 56.2 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL3280 Marker 144.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3280 Marker 245.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL3280 Marker 118.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 BNL3280 Marker Cotton 36,736,808 - 36,737,272 (bp) Automated name-based View Maps
Cotton - T3 - 18 BNL3280 Marker 47.32 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3280 Marker 37.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c18 BNL3280 Marker 93 (cM) Automated name-based View Maps
Cotton - CH - 18 BNL3280 Marker 65 (cM) Automated name-based View Maps
Gh428 Marker 103.82 Cotton - HDC - 20 Gh428 Marker 37.4 (cM) Automated name-based View Maps
Cotton - E3 - 20 Gh428 Marker 45.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gh428 Marker Cotton 59,830,372 - 59,830,908 (bp) Automated name-based View Maps
NAU2139 Marker 106.23 Cotton - HDC - 10 CLU3831 Marker 47.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3831 Marker 34.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3831 Marker 21.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU2139 Marker 13.8 (cM) Automated name-based View Maps
DPL0350 Marker 107.33 Cotton - HDC - 20 DPL0350 Marker 33.6 (cM) Automated name-based View Maps
Gh277 Marker 110.21 Cotton - HDC - 20 Gh277 Marker 30.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 Gh277 Marker Cotton 61,149,661 - 61,150,309 (bp) Automated name-based View Maps
Cotton - E3 - 20 Gh277 Marker 16.6 (cM) Automated name-based View Maps
Gh110 Marker 112.26 Cotton - HDC - 20 CLU232 Marker 28.2 (cM) Automated name-based View Maps
Cotton - E3 - 20 Gh110 Marker 28.1 (cM) Automated name-based View Maps
BNL3646 Marker 115.53 Cotton - GVc - 20 BNL3646 Marker 158.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL3646 Marker 96.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL3646 Marker 24.7 (cM) Automated name-based View Maps
Cotton - TH - 20 BNL3646 Marker 111.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL3646 Marker 263.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 BNL3646 Marker Cotton 61,792,601 - 61,792,808 (bp) Automated name-based View Maps
DPL0600 Marker 116.39 Cotton - Graimondii_physical - Gr_Chr11 DPL0600 Marker Cotton 61,963,258 - 61,963,871 (bp) Automated name-based View Maps
Cotton - HDC - 20 DPL0600 Marker 23.8 (cM) Automated name-based View Maps
NAU2139 Marker 119.01 Cotton - HDC - 10 CLU3831 Marker 47.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3831 Marker 34.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 CLU3831 Marker 21.2 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU2139 Marker 13.8 (cM) Automated name-based View Maps
DOW059 Marker 0 Cotton - HDC - 20 DOW059 Marker 153 (cM) Automated name-based View Maps
NAU2353 Marker 3.94 Cotton - HDC - 20 CLU3936 Marker 149.1 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU2353 Marker 2.3 (cM) Automated name-based View Maps
TMB0999 Marker 4.37 Cotton - HDC - 20 TMB0999 Marker 148.6 (cM) Automated name-based View Maps
DPL0317 Marker 7.72 Cotton - Graimondii_physical - Gr_Chr11 DPL0317 Marker Cotton 175,545 - 175,841 (bp) Automated name-based View Maps
Cotton - HDC - 20 DPL0317 Marker 145.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 DPL0317 Marker 68.1 (cM) Automated name-based View Maps
Cotton - T3 - 10 DPL0317 Marker 51.45 (cM) Automated name-based View Maps
Cotton - E3 - 10 DPL0317 Marker 179.6 (cM) Automated name-based View Maps
STV031 Marker 9.99 Cotton - HDC - 10 STV031 Marker 184.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 STV031 Marker Cotton 1,693,064 - 1,693,457 (bp) Automated name-based View Maps
Cotton - TH - 10 STV031 Marker 12.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 STV031 Marker 143 (cM) Automated name-based View Maps
Cotton - TH - 20 STV031 Marker 12.4 (cM) Automated name-based View Maps
MUSS467 Marker 15.02 Cotton - HDC - 20 CLU2756 Marker 138 (cM) Automated name-based View Maps
Cotton - GVc - 20 MUSS467 Marker 30.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 MUSS467 Marker 12.16 (cM) Automated name-based View Maps
Cotton - E3 - 20 MUSS467 Marker 149.3 (cM) Automated name-based View Maps
NAU2225 Marker 20.73 Cotton - Graimondii_physical - Gr_Chr11 NAU2225 Marker Cotton 4,649,158 - 4,649,709 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU2225 Marker 128 (cM) Automated name-based View Maps
MUSB0338 Marker 23.21 Cotton - Guazuncho2xVH8-RIL - c20 MUSB0338 Marker 29.75 (cM) Automated name-based View Maps
Cotton - GVc - 20 MUSB0338 Marker 49 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 MUSB0338 Marker Cotton 5,240,210 - 5,241,449 (bp) Automated name-based View Maps
Cotton - HDC - 20 MUSB0338 Marker 123.7 (cM) Automated name-based View Maps
BNL1145 Marker 26.72 Cotton - PK - c2 BNL1145 Marker 97.8 (cM) Automated name-based View Maps
Cotton - HDC - 20 BNL1145 Marker 121.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c20 BNL1145 Marker 91 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c20 BNL1145 Marker 3.2 (cM) Automated name-based View Maps
Cotton - E3 - 20 BNL1145 Marker 122.3 (cM) Automated name-based View Maps
Cotton - PK - c20 BNL1145 Marker 48.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c20 BNL1145 Marker 26.63 (cM) Automated name-based View Maps
Cotton - GVc - 20 BNL1145 Marker 45.6 (cM) Automated name-based View Maps
Cotton - CH - 20 BNL1145 Marker 109.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL1145 Marker 54.3 (cM) Automated name-based View Maps
DPL0296 Marker 28.46 Cotton - HDC - 20 DPL0296 Marker 120.2 (cM) Automated name-based View Maps
DPL0486 Marker 30.48 Cotton - HDC - 20 DPL0486 Marker 118.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 DPL0486 Marker Cotton 52,999,026 - 52,999,680 (bp) Automated name-based View Maps
TMB1630 Marker 33.28 Cotton - HDC - 20 TMB1630 Marker 117 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 TMB1630 Marker Cotton 7,650,954 - 7,651,636 (bp) Automated name-based View Maps