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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
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Maps 22
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 22
Map Start: 0 cM
Map Stop: 110.9 cM
Features by Type:
61 Marker
61 Total

Map Features

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Items 1 to 25 of 61.       of 3 | Next
Cotton - T3 - 22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
UCcot10434_386 Marker 0 No other positions
UCcot10434_204 Marker 1.04 No other positions
NAU0934 Marker 4.98 Cotton - HDC - 5 NAU0934 Marker 5.7 (cM) Automated name-based View Maps
Cotton - T3 - 5 NAU0934 Marker 191.24 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU0934 Marker Cotton 2,219,803 - 2,220,456 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 NAU0934c Marker 69.85 (cM) Automated name-based View Maps
Cotton - GVc - 1 NAU0934 Marker 83 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU0934 Marker 195.4 (cM) Automated name-based View Maps
Cotton - HDC - 1 NAU0934 Marker 81.3 (cM) Automated name-based View Maps
BNL0673 Marker 8.47 No other positions
DPL0417 Marker 9.06 No other positions
DPL0722 Marker 14.06 Cotton - Graimondii_physical - Gr_Chr12 DPL0722 Marker Cotton 3,415,406 - 3,416,176 (bp) Automated name-based View Maps
Cotton - HDC - 22 DPL0722 Marker 27.8 (cM) Automated name-based View Maps
Cotton - E3 - 22 DPL0722 Marker 137.1 (cM) Automated name-based View Maps
BNL0448 Marker 17.59 Cotton - HDC - 22 BNL0448 Marker 30.7 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0448 Marker 110.4 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL0448 Marker 22.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL0448 Marker Cotton 4,549,496 - 4,549,873 (bp) Automated name-based View Maps
CIR253 Marker 19.34 Cotton - GVc - 5 CIR253 Marker 122.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR253b Marker 72.76 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU90 Marker 18.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR253 Marker 316.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR253 Marker 98.9 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR253 Marker 163.98 (cM) Automated name-based View Maps
Cotton - CH - 22 CIR253 Marker 108.7 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR253 Marker 167.8 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR253 Marker 86.1 (cM) Automated name-based View Maps
Cotton - TH - 5 CIR253 Marker 174.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU90 Marker 20.2 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR253 Marker 49.6 (cM) Automated name-based View Maps
TMB1958 Marker 22.07 Cotton - HDC - 22 CLU90 Marker 20.2 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU90 Marker 18.1 (cM) Automated name-based View Maps
BNL4030 Marker 27.12 Cotton - HDC - 5 BNL4030 Marker 25.9 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 124.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 57.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 24.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
JESPR050 Marker 27.32 Cotton - TH - 5 JESPR050 Marker 169.6 (cM) Automated name-based View Maps
Cotton - E3 - 5 JESPR050 Marker 177.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR050 Marker 27.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR050 Marker 36.7 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR050 Marker 34.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 JESPR050 Marker 154.07 (cM) Automated name-based View Maps
Gh200 Marker 30.06 Cotton - HDC - 22 Gh200 Marker 41.1 (cM) Automated name-based View Maps
Cotton - E3 - 22 Gh200 Marker 103.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 Gh200 Marker Cotton 8,503,571 - 8,504,078 (bp) Automated name-based View Maps
MUSB0876 Marker 33.76 Cotton - HDC - 19 MUSB0876 Marker 1.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUSB0876 Marker Cotton 7,421,273 - 7,421,937 (bp) Automated name-based View Maps
Gh526 Marker 36.4 No other positions
Gh022 Marker 38.48 No other positions
DPL0055 Marker 39.45 No other positions
Gh591 Marker 41.96 Cotton - E3 - 25 Gh591 Marker 72.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gh591 Marker 39.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gh591 Marker 91.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 Gh591 Marker Cotton 63,204,845 - 63,205,658 (bp) Automated name-based View Maps
Cotton - E3 - 22 Gh591 Marker 108.3 (cM) Automated name-based View Maps
NAU2376 Marker 48.57 Cotton - HDC - 22 NAU2376 Marker 41.7 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU2376 Marker 149.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU2376 Marker 46.4 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2376 Marker 57.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU2376 Marker Cotton 14,842,402 - 14,842,953 (bp) Automated name-based View Maps
Gh052 Marker 49.35 Cotton - E3 - 22 Gh052 Marker 87.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 Gh052 Marker 40.8 (cM) Automated name-based View Maps
MUSS396 Marker 49.8 Cotton - HDC - 4 CLU759 Marker 39 (cM) Automated name-based View Maps
Cotton - T3 - 4 MUSS396 Marker 38.29 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU759 Marker 42.9 (cM) Automated name-based View Maps
JESPR063 Marker 50.69 Cotton - Graimondii_physical - Gr_Chr12 JESPR063 Marker Cotton 18,353,485 - 18,353,874 (bp) Automated name-based View Maps
Cotton - E3 - 1 JESPR063 Marker 56.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR063 Marker 43.3 (cM) Automated name-based View Maps
Cotton - T3 - 1 JESPR063 Marker 59.81 (cM) Automated name-based View Maps
Cotton - HDC - 1 JESPR063 Marker 66.1 (cM) Automated name-based View Maps
Cotton - T3 - 15 JESPR063 Marker 65 (cM) Automated name-based View Maps
Cotton - HDC - 15 JESPR063 Marker 79.4 (cM) Automated name-based View Maps
TMB2500 Marker 51.23 Cotton - HDC - 22 CLU107 Marker 44.2 (cM) Automated name-based View Maps
Gh252 Marker 52.05 Cotton - HDC - 22 CLU252 Marker 45.1 (cM) Automated name-based View Maps
Cotton - T3 - 5 Gh252 Marker 136.46 (cM) Automated name-based View Maps
Cotton - HDC - 13 CLU252 Marker 72.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU252 Marker 38.6 (cM) Automated name-based View Maps
NAU2302 Marker 53.1 Cotton - E3 - 22 NAU2302 Marker 91.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 NAU2302 Marker 45.9 (cM) Automated name-based View Maps
JESPR184 Marker 53.42 Cotton - TH - 22 JESPR184 Marker 52.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR184 Marker 45.5 (cM) Automated name-based View Maps
Cotton - TH - 5 JESPR184 Marker 153 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR184 Marker 44.3 (cM) Automated name-based View Maps