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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 24
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 24
Map Start: 0 cM
Map Stop: 118.76 cM
Features by Type:
65 Marker
65 Total

Map Features

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Items 1 to 25 of 65.       of 3 | Next
Cotton - T3 - 24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TMB1244 Marker 23.47 Cotton - Graimondii_physical - Gr_Chr04 TMB1244 Marker Cotton 34,226,667 - 34,227,469 (bp) Automated name-based View Maps
Cotton - HDC - 24 TMB1244 Marker 106.6 (cM) Automated name-based View Maps
TMB1182 Marker 23.64 Cotton - Graimondii_physical - Gr_Chr04 TMB1182 Marker Cotton 34,863,750 - 34,864,142 (bp) Automated name-based View Maps
Cotton - HDC - 24 TMB1182 Marker 106.4 (cM) Automated name-based View Maps
Cotton - E3 - 24 TMB1182 Marker 31.7 (cM) Automated name-based View Maps
TMB0555 Marker 23.66 Cotton - HDC - 24 TMB0555 Marker 106.4 (cM) Automated name-based View Maps
CIR270 Marker 23.68 Cotton - HDC - 7 CLU92 Marker 70.1 (cM) Automated name-based View Maps
Cotton - GVc - 15 CIR270 Marker 54.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU92 Marker 106.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 CIR270 Marker 91 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU92 Marker 77.1 (cM) Automated name-based View Maps
DPL0228 Marker 24 Cotton - E3 - 21 DPL0228 Marker 77.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr07 DPL0228 Marker Cotton 50,984,106 - 50,984,681 (bp) Automated name-based View Maps
Cotton - HDC - 21 DPL0228 Marker 136.5 (cM) Automated name-based View Maps
Cotton - HDC - 24 DPL0228 Marker 106.1 (cM) Automated name-based View Maps
Gh272 Marker 24.69 Cotton - Graimondii_physical - Gr_Chr04 Gh272 Marker Cotton 28,545,151 - 28,545,974 (bp) Automated name-based View Maps
Cotton - HDC - 24 Gh272 Marker 105.4 (cM) Automated name-based View Maps
Gh237 Marker 25.36 Cotton - HDC - 24 Gh237 Marker 104.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 Gh237 Marker Cotton 34,972,075 - 34,972,525 (bp) Automated name-based View Maps
Cotton - E3 - 24 Gh237 Marker 3.7 (cM) Automated name-based View Maps
BNL2655 Marker 26.57 Cotton - E3 - 24 BNL2655 Marker 33 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL2655 Marker 75.9 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL2655 Marker 91 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2655 Marker Cotton 37,477,437 - 37,477,712 (bp) Automated name-based View Maps
Cotton - CH - 24 BNL2655 Marker 119.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL2655 Marker 110.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL2655 Marker 103.7 (cM) Automated name-based View Maps
BNL2499 Marker 26.87 Cotton - Guazuncho2xVH8-BC1 - D03 BNL2499 Marker 110.6 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL2499 Marker 33.4 (cM) Automated name-based View Maps
Cotton - TH - 24 BNL2499 Marker 91.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2499 Marker Cotton 38,327,810 - 38,328,406 (bp) Automated name-based View Maps
Cotton - GVc - 24 BNL2499 Marker 75 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL2499 Marker 103.3 (cM) Automated name-based View Maps
JESPR033 Marker 27.25 Cotton - Graimondii_physical - Gr_Chr04 JESPR033 Marker Cotton 34,598,746 - 34,599,002 (bp) Automated name-based View Maps
Cotton - HDC - 24 JESPR033 Marker 103 (cM) Automated name-based View Maps
NAU1322 Marker 28 Cotton - HDC - 8 CLU1290 Marker 106.1 (cM) Automated name-based View Maps
Cotton - TH - 24 NAU1322 Marker 90.5 (cM) Automated name-based View Maps
Cotton - T3 - 8 NAU1322 Marker 51.18 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU1290 Marker 102.3 (cM) Automated name-based View Maps
MUSS280 Marker 29.43 Cotton - HDC - 8 CLU995 Marker 100.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU995 Marker 100.9 (cM) Automated name-based View Maps
BNL0387 Marker 30.31 Cotton - HDC - 24 BNL0387 Marker 100.1 (cM) Automated name-based View Maps
Cotton - E3 - 8 BNL0387 Marker 38.3 (cM) Automated name-based View Maps
Cotton - CH - 8 BNL0387 Marker 128.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 BNL0387a Marker 51.42 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL0387 Marker 55.65 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL0387 Marker 118.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 BNL0387 Marker 104 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL0387 Marker 77.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL0387b Marker 61.23 (cM) Automated name-based View Maps
CIR289 Marker 36.27 Cotton - Guazuncho2xVH8-BC1 - D03 CIR289 Marker 113.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 CIR289 Marker 61.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CIR289 Marker Cotton 35,547,986 - 35,548,226 (bp) Automated name-based View Maps
Cotton - HDC - 24 CIR289 Marker 128.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 CIR289 Marker 107.2 (cM) Automated name-based View Maps
Cotton - E3 - 24 CIR289 Marker 7.7 (cM) Automated name-based View Maps
Cotton - GVc - 24 CIR289 Marker 77.8 (cM) Automated name-based View Maps
TMB1289 Marker 37.77 Cotton - HDC - 24 TMB1289 Marker 93.3 (cM) Automated name-based View Maps
TMB0429 Marker 39.47 Cotton - HDC - 24 TMB0429 Marker 91.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB0429 Marker Cotton 42,901,630 - 42,901,996 (bp) Automated name-based View Maps
DPL0202 Marker 39.62 Cotton - HDC - 24 DPL0202 Marker 91.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 DPL0202 Marker Cotton 42,663,592 - 42,664,211 (bp) Automated name-based View Maps
DPL0534 Marker 41.98 Cotton - E3 - 24 DPL0534 Marker 40.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 DPL0534 Marker 89.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 DPL0534 Marker Cotton 44,396,415 - 44,397,110 (bp) Automated name-based View Maps
TMB1639 Marker 45.16 Cotton - E3 - 24 TMB1639 Marker 43.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 TMB1639 Marker 86.5 (cM) Automated name-based View Maps
Cotton - T3 - 8 TMB1639 Marker 68.11 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB1639 Marker Cotton 45,854,758 - 45,855,283 (bp) Automated name-based View Maps
Cotton - HDC - 8 TMB1639 Marker 94.4 (cM) Automated name-based View Maps
DPL0191 Marker 45.96 Cotton - E3 - 24 DPL0191 Marker 45.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU177 Marker 85.8 (cM) Automated name-based View Maps
TMB0072 Marker 47.15 Cotton - E3 - 24 TMB0072 Marker 45.7 (cM) Automated name-based View Maps
Cotton - HDC - 24 TMB0072 Marker 84.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB0072 Marker Cotton 45,937,000 - 45,937,391 (bp) Automated name-based View Maps
Gh458 Marker 50.06 Cotton - HDC - 24 CLU292 Marker 82 (cM) Automated name-based View Maps
NAU0891 Marker 51.24 Cotton - TH - 24 NAU0891 Marker 82.4 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU0891 Marker 80.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU0891 Marker Cotton 46,646,846 - 46,647,510 (bp) Automated name-based View Maps
JESPR291 Marker 52.73 Cotton - Graimondii_physical - Gr_Chr04 JESPR291 Marker Cotton 426,180 - 426,640 (bp) Automated name-based View Maps
Cotton - HDC - 8 JESPR291 Marker 159.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 JESPR291 Marker 79.5 (cM) Automated name-based View Maps
Cotton - TH - 24 JESPR291 Marker 150.3 (cM) Automated name-based View Maps
Cotton - T3 - 8 JESPR291 Marker 0 (cM) Automated name-based View Maps
MUCS113 Marker 53.21 Cotton - E3 - 24 MUCS113 Marker 49.2 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU2762 Marker 81.8 (cM) Automated name-based View Maps