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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 25
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 25
Map Start: 0 cM
Map Stop: 126.88 cM
Features by Type:
69 Marker
69 Total

Map Features

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Items 1 to 25 of 69.       of 3 | Next
Cotton - T3 - 25
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL1440 Marker 65.31 Cotton - Guazuncho2xVH8-BC2 - c6 BNL1440 Marker 43.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1440a Marker 18.52 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1440 Marker 83.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1440 Marker 108.1 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL1440 Marker 69.7 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL1440 Marker 89.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL1440 Marker 83.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 BNL1440b Marker 34.18 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1440 Marker 68.81 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL1440 Marker 28.5 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1440 Marker 66.3 (cM) Automated name-based View Maps
Cotton - CH - 25 BNL1440 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1440 Marker Cotton 17,749,853 - 17,750,142 (bp) Automated name-based View Maps
Cotton - GVc - 6 BNL1440 Marker 48.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1440 Marker 101.4 (cM) Automated name-based View Maps
Cotton - TH - 6 BNL1440 Marker 69.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c25 BNL1440 Marker 63.3 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL1440 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL1440 Marker 84.9 (cM) Automated name-based View Maps
Cotton - E3 - 25 BNL1440 Marker 79 (cM) Automated name-based View Maps
DPL0067 Marker 64.88 Cotton - E3 - 25 DPL0067 Marker 80.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 DPL0067 Marker 83.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 DPL0067 Marker Cotton 18,205,949 - 18,206,234 (bp) Automated name-based View Maps
TMB2911 Marker 64.1 Cotton - HDC - 25 TMB2911 Marker 82.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 TMB2911 Marker Cotton 43,938,503 - 43,939,300 (bp) Automated name-based View Maps
Gh220 Marker 63.1 Cotton - E3 - 25 Gh220 Marker 79.2 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gh220 Marker 81.5 (cM) Automated name-based View Maps
DPL0239 Marker 62.78 Cotton - HDC - 25 DPL0239 Marker 81.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 DPL0239 Marker Cotton 19,260,021 - 19,260,575 (bp) Automated name-based View Maps
Cotton - E3 - 25 DPL0239 Marker 76.1 (cM) Automated name-based View Maps
MUSS327 Marker 62.36 Cotton - HDC - 25 MUSS327 Marker 80.8 (cM) Automated name-based View Maps
MUCS340 Marker 62.21 Cotton - Graimondii_physical - Gr_Chr10 MUCS340 Marker Cotton 19,991,106 - 19,991,619 (bp) Automated name-based View Maps
Cotton - HDC - 25 MUCS340 Marker 80.6 (cM) Automated name-based View Maps
DPL0532 Marker 61.73 Cotton - Graimondii_physical - Gr_Chr10 DPL0532 Marker Cotton 20,263,741 - 20,264,467 (bp) Automated name-based View Maps
Cotton - HDC - 25 DPL0532 Marker 80.1 (cM) Automated name-based View Maps
DPL0519 Marker 58.88 Cotton - Graimondii_physical - Gr_Chr10 DPL0519 Marker Cotton 22,762,676 - 22,763,412 (bp) Automated name-based View Maps
Cotton - HDC - 25 DPL0519 Marker 77.3 (cM) Automated name-based View Maps
Cotton - E3 - 25 DPL0519 Marker 84.3 (cM) Automated name-based View Maps
DPL0075 Marker 58.73 Cotton - Graimondii_physical - Gr_Chr10 DPL0075 Marker Cotton 22,620,755 - 22,621,314 (bp) Automated name-based View Maps
Cotton - E3 - 25 DPL0075 Marker 83.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 DPL0075 Marker 77.1 (cM) Automated name-based View Maps
Gh515 Marker 58.02 Cotton - E3 - 25 Gh515 Marker 84.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 Gh515 Marker Cotton 26,395,408 - 26,395,987 (bp) Automated name-based View Maps
Cotton - HDC - 25 Gh515 Marker 76.4 (cM) Automated name-based View Maps
TMB0436 Marker 56.05 Cotton - HDC - 25 TMB0436 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 TMB0436 Marker Cotton 38,346,374 - 38,347,074 (bp) Automated name-based View Maps
Cotton - T3 - 6 TMB0436 Marker 55.9 (cM) Automated name-based View Maps
Cotton - HDC - 6 TMB0436 Marker 87.6 (cM) Automated name-based View Maps
NAU2238 Marker 55.97 Cotton - HDC - 6 CLU3879 Marker 87.5 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU2238 Marker 60 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU2238 Marker 48.2 (cM) Automated name-based View Maps
Cotton - T3 - 6 NAU2238 Marker 55.75 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU3879 Marker 74.4 (cM) Automated name-based View Maps
DPL0301 Marker 55.91 Cotton - Graimondii_physical - Gr_Chr10 DPL0301 Marker Cotton 36,937,286 - 36,937,864 (bp) Automated name-based View Maps
Cotton - HDC - 25 DPL0301 Marker 74.2 (cM) Automated name-based View Maps
MUSS275 Marker 55.88 Cotton - HDC - 6 CLU1335 Marker 87.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 MUSS275 Marker 55.73 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU1335 Marker 74.3 (cM) Automated name-based View Maps
TMB2898 Marker 55.77 Cotton - E3 - 25 TMB2898 Marker 114.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 TMB2898 Marker Cotton 25,474,111 - 25,474,743 (bp) Automated name-based View Maps
Cotton - HDC - 25 TMB2898 Marker 74.1 (cM) Automated name-based View Maps
BNL3937 Marker 55.51 Cotton - HDC - 25 BNL3937 Marker 73.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL3937 Marker Cotton 25,302,993 - 25,303,432 (bp) Automated name-based View Maps
BNL1169 Marker 55.07 Cotton - HDC - 6 BNL1169 Marker 88 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL1169 Marker 56.31 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL1169 Marker 73.4 (cM) Automated name-based View Maps
TMB0508 Marker 54.78 Cotton - Graimondii_physical - Gr_Chr04 TMB0508 Marker Cotton 45,747,109 - 45,747,557 (bp) Automated name-based View Maps
Cotton - HDC - 25 TMB0508 Marker 73.1 (cM) Automated name-based View Maps
DPL0377 Marker 54.43 Cotton - E3 - 25 DPL0377 Marker 92.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 DPL0377 Marker 72.7 (cM) Automated name-based View Maps
Gh077 Marker 53.51 Cotton - E3 - 25 Gh077 Marker 100.1 (cM) Automated name-based View Maps
Cotton - HDC - 25 Gh077 Marker 71.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 Gh077 Marker Cotton 43,963,091 - 43,963,812 (bp) Automated name-based View Maps
BNL3103 Marker 52.54 Cotton - CH - 25 BNL3103 Marker 99.7 (cM) Automated name-based View Maps
Cotton - GVc - 25 BNL3103 Marker 83 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c25 BNL3103 Marker 107.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 BNL3103 Marker 70.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL3103 Marker Cotton 40,569,897 - 40,570,358 (bp) Automated name-based View Maps
Cotton - E3 - 25 BNL3103 Marker 88.2 (cM) Automated name-based View Maps
Cotton - TH - 25 BNL3103 Marker 31.5 (cM) Automated name-based View Maps
MUSS501 Marker 51.87 Cotton - HDC - 25 CLU2763 Marker 70.2 (cM) Automated name-based View Maps
Cotton - T3 - 6 MUSS501 Marker 54.45 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU2763 Marker 86.4 (cM) Automated name-based View Maps
NAU0905 Marker 51.35 Cotton - TH - 25 NAU0905 Marker 49.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU0905 Marker 69.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU0905 Marker 109 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU0905 Marker 83.3 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU0905 Marker 60.3 (cM) Automated name-based View Maps
Cotton - T3 - 6 NAU0905 Marker 50.83 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU0905 Marker 78.1 (cM) Automated name-based View Maps
TMB1342 Marker 50.96 Cotton - HDC - 25 CLU125 Marker 69.2 (cM) Automated name-based View Maps