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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 26
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 26
Map Start: 0 cM
Map Stop: 112.34 cM
Features by Type:
56 Marker
56 Total

Map Features

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Items 1 to 25 of 56.       of 3 | Next
Cotton - T3 - 26
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MUSS058 Marker 109.66 Cotton - HDC - 26 MUSS058 Marker 142 (cM) Automated name-based View Maps
DPL0886 Marker 102.16 Cotton - HDC - 26 DPL0886 Marker 134.3 (cM) Automated name-based View Maps
BNL2557 Marker 93.04 Cotton - E3 - 26 BNL2557 Marker 111.2 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL2557 Marker 31.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL2557 Marker 124.9 (cM) Automated name-based View Maps
NAU2251 Marker 90.27 Cotton - HDC - 26 CLU1371 Marker 122.1 (cM) Automated name-based View Maps
Cotton - E3 - 12 NAU2251 Marker 177.3 (cM) Automated name-based View Maps
Cotton - T3 - 12 NAU2251 Marker 108.67 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU2251 Marker 112.5 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU2251 Marker 121.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU1371 Marker 97.3 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU2251 Marker 102.5 (cM) Automated name-based View Maps
CIR032 Marker 84.22 Cotton - Graimondii_physical - Gr_Chr08 CIR032 Marker Cotton 52,164,512 - 52,164,710 (bp) Automated name-based View Maps
Cotton - GVc - 26 CIR032 Marker 28.2 (cM) Automated name-based View Maps
Cotton - HDC - 26 CIR032 Marker 115.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 CIR032 Marker 65.5 (cM) Automated name-based View Maps
Cotton - CH - 26 CIR032 Marker 49.7 (cM) Automated name-based View Maps
MUCS019 Marker 81.33 Cotton - HDC - 26 CLU2709 Marker 113.5 (cM) Automated name-based View Maps
BNL3537 Marker 80.61 Cotton - Guazuncho2xVH8-BC2 - c26 BNL3537 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL3537 Marker 93.2 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL3537 Marker 30.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL3537 Marker Cotton 52,796,481 - 52,796,742 (bp) Automated name-based View Maps
Cotton - T3 - 12 BNL3537 Marker 103.65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 BNL3537 Marker 20.21 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL3537 Marker 90.7 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL3537 Marker 47.4 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL3537 Marker 34.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL3537b Marker 14.75 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL3537 Marker 112.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL3537 Marker 67.1 (cM) Automated name-based View Maps
TMB2748 Marker 76.82 Cotton - HDC - 26 TMB2748 Marker 109.2 (cM) Automated name-based View Maps
BNL2725 Marker 75.71 Cotton - E3 - 26 BNL2725 Marker 80.5 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL2725 Marker 58.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL2725 Marker Cotton 50,464,216 - 50,464,616 (bp) Automated name-based View Maps
Cotton - HDC - 26 BNL2725 Marker 108.2 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL2725 Marker 83 (cM) Automated name-based View Maps
DPL0069 Marker 74.12 Cotton - HDC - 26 CLU173 Marker 104.8 (cM) Automated name-based View Maps
TMB0083 Marker 73.01 Cotton - E3 - 26 TMB0083 Marker 84.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 TMB0083 Marker Cotton 51,097,447 - 51,097,915 (bp) Automated name-based View Maps
Cotton - HDC - 26 TMB0083 Marker 105.6 (cM) Automated name-based View Maps
DPL0890 Marker 72.23 Cotton - E3 - 26 DPL0890 Marker 80.7 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU173 Marker 104.8 (cM) Automated name-based View Maps
JESPR121 Marker 72.17 Cotton - HDC - 12 JESPR121 Marker 81 (cM) Automated name-based View Maps
Cotton - TH - 26 JESPR121 Marker 83.7 (cM) Automated name-based View Maps
Cotton - HDC - 26 JESPR121 Marker 104.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 JESPR121 Marker Cotton 50,423,378 - 50,423,708 (bp) Automated name-based View Maps
Cotton - T3 - 12 JESPR121 Marker 93.02 (cM) Automated name-based View Maps
Cotton - E3 - 12 JESPR121 Marker 145.6 (cM) Automated name-based View Maps
Cotton - CH - 12 JESPR121 Marker 78.2 (cM) Automated name-based View Maps
UCcot10465_113 Marker 71.58 Cotton - HDC - 26 UCcot10465_113 Marker 104.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 UCcot10465_113 Marker Cotton 50,161,123 - 50,161,225 (bp) Automated name-based View Maps
NAU1231 Marker 69.77 Cotton - TH - 26 NAU1231 Marker 80 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU1231 Marker 102.5 (cM) Automated name-based View Maps
Cotton - CH - 26 NAU1231 Marker 60.8 (cM) Automated name-based View Maps
Gh629 Marker 69.27 Cotton - E3 - 26 Gh629 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU341 Marker 102 (cM) Automated name-based View Maps
Gh660 Marker 68.21 Cotton - HDC - 26 CLU439 Marker 100.8 (cM) Automated name-based View Maps
Cotton - E3 - 26 Gh660 Marker 75.8 (cM) Automated name-based View Maps
JESPR136 Marker 68.06 Cotton - HDC - 26 CLU439 Marker 100.8 (cM) Automated name-based View Maps
Cotton - TH - 26 JESPR136 Marker 86.6 (cM) Automated name-based View Maps
Cotton - E3 - 26 JESPR136 Marker 76.9 (cM) Automated name-based View Maps
BNL2495 Marker 62.72 Cotton - CH - 26 BNL2495 Marker 70.3 (cM) Automated name-based View Maps
Cotton - PK - c26 BNL2495 Marker 65.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL2495 Marker 82.6 (cM) Automated name-based View Maps
Cotton - E3 - 26 BNL2495 Marker 66.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL2495 Marker Cotton 46,953,065 - 46,953,609 (bp) Automated name-based View Maps
Cotton - GVc - 26 BNL2495 Marker 46.9 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL2495 Marker 75 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL2495 Marker 95.7 (cM) Automated name-based View Maps
CIR085 Marker 61.26 Cotton - HDC - 26 CIR085 Marker 94.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 CIR085 Marker Cotton 46,515,241 - 46,515,554 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 CIR085 Marker 84 (cM) Automated name-based View Maps
Cotton - TH - 26 CIR085 Marker 72.2 (cM) Automated name-based View Maps
Cotton - GVc - 26 CIR085 Marker 46 (cM) Automated name-based View Maps
UCcg10190_179 Marker 60.38 Cotton - Graimondii_physical - Gr_Chr08 UCcg10190_179 Marker Cotton 45,973,195 - 45,973,297 (bp) Automated name-based View Maps
Cotton - HDC - 26 UCcg10190_179 Marker 93.6 (cM) Automated name-based View Maps
BNL0341 Marker 56.76 Cotton - E3 - 26 BNL0341 Marker 54 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL0341 Marker 68.3 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL0341 Marker 31.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 BNL0341 Marker 37.79 (cM) Automated name-based View Maps
Cotton - PK - c26 BNL0341 Marker 77.5 (cM) Automated name-based View Maps
Cotton - GVc - 26 BNL0341 Marker 51.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c26 BNL341 Marker 20.3 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL0341 Marker 90.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 BNL341 Marker 89.1 (cM) Automated name-based View Maps
Cotton - CH - 26 BNL0341 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL0341 Marker Cotton 44,036,795 - 44,037,096 (bp) Automated name-based View Maps
NAU2372 Marker 53.67 Cotton - HDC - 26 CLU3941 Marker 87.9 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU2372 Marker 69.4 (cM) Automated name-based View Maps
MUCS064 Marker 52.85 Cotton - Guazuncho2xVH8-RIL - c26 MUCS064 Marker 39.64 (cM) Automated name-based View Maps
Cotton - GVc - 26 MUCS064 Marker 53.3 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU2737 Marker 87.1 (cM) Automated name-based View Maps
Cotton - E3 - 26 MUCS064 Marker 56.8 (cM) Automated name-based View Maps
Gh243 Marker 50.41 Cotton - HDC - 12 Gh243 Marker 53.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 Gh243 Marker 84.3 (cM) Automated name-based View Maps
Cotton - E3 - 12 Gh243 Marker 110.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 Gh243 Marker Cotton 41,188,572 - 41,189,249 (bp) Automated name-based View Maps
Cotton - T3 - 12 Gh243 Marker 71.05 (cM) Automated name-based View Maps
Cotton - E3 - 26 Gh243 Marker 51.4 (cM) Automated name-based View Maps