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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 2
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 118.38 cM
Features by Type:
60 Marker
60 Total

Map Features

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Items 1 to 25 of 60.       of 3 | Next
Cotton - T3 - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MUSS294 Marker 62.89 Cotton - HDC - 2 MUSS294 Marker 66.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 MUSS294 Marker Cotton 17,167,533 - 17,168,149 (bp) Automated name-based View Maps
DPL0261 Marker 62.58 Cotton - HDC - 2 DPL0261 Marker 66.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 DPL0261 Marker Cotton 22,416,368 - 22,416,931 (bp) Automated name-based View Maps
MUSB0915 Marker 61.54 Cotton - Graimondii_physical - Gr_Chr09 MUSB0915 Marker Cotton 17,264,586 - 17,265,412 (bp) Automated name-based View Maps
Cotton - E3 - 2 MUSB0915 Marker 84.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0915 Marker 65.9 (cM) Automated name-based View Maps
BNL3590 Marker 60.68 Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
JESPR101 Marker 60.15 Cotton - T3 - 17 JESPR101 Marker 43.57 (cM) Automated name-based View Maps
Cotton - TH - 17 JESPR101 Marker 52.3 (cM) Automated name-based View Maps
Cotton - E3 - 2 JESPR101 Marker 76 (cM) Automated name-based View Maps
Cotton - TH - 2 JESPR101 Marker 49.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 JESPR101b Marker 35.67 (cM) Automated name-based View Maps
Cotton - GVc - 17 JESPR101 Marker 28.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 JESPR101a Marker 30.32 (cM) Automated name-based View Maps
Cotton - CH - 17 JESPR101 Marker 69.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR101 Marker 65.2 (cM) Automated name-based View Maps
Cotton - GVc - 2 JESPR101 Marker 43.7 (cM) Automated name-based View Maps
Cotton - CH - 2 JESPR101 Marker 39 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR101 Marker 70.5 (cM) Automated name-based View Maps
MUCS620 Marker 59.7 Cotton - HDC - 2 CLU1510 Marker 64.6 (cM) Automated name-based View Maps
BNL3971 Marker 59.5 Cotton - Guazuncho2xVH8-RIL - c2 BNL3971 Marker 36.49 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3971 Marker 64.4 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3971 Marker 48.1 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3971 Marker 45.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3971 Marker 84.3 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3971 Marker 53.1 (cM) Automated name-based View Maps
Cotton - PK - c2 BNL3971 Marker 88.7 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3971 Marker 78.3 (cM) Automated name-based View Maps
MUSS599 Marker 59.18 Cotton - HDC - 2 CLU1510 Marker 64.6 (cM) Automated name-based View Maps
TMB0471 Marker 57.79 Cotton - HDC - 17 TMB0471 Marker 68.6 (cM) Automated name-based View Maps
Cotton - T3 - 17 TMB0471 Marker 45.64 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB0471 Marker Cotton 25,194,624 - 25,195,064 (bp) Automated name-based View Maps
Cotton - HDC - 2 TMB0471 Marker 62.9 (cM) Automated name-based View Maps
DPL0216 Marker 57.03 Cotton - HDC - 2 DPL0216 Marker 62.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 DPL0216 Marker Cotton 10,026,253 - 10,026,916 (bp) Automated name-based View Maps
Cotton - E3 - 2 DPL0216 Marker 81.2 (cM) Automated name-based View Maps
MUCS106 Marker 56.99 Cotton - T3 - 17 MUCS106 Marker 42.32 (cM) Automated name-based View Maps
Cotton - HDC - 17 MUCS106 Marker 71.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUCS106 Marker 62.1 (cM) Automated name-based View Maps
UCcg10587_240 Marker 56.94 Cotton - HDC - 2 UCcg10587_240 Marker 62 (cM) Automated name-based View Maps
TMB0514 Marker 56.78 Cotton - HDC - 2 TMB0514 Marker 62 (cM) Automated name-based View Maps
Cotton - E3 - 2 TMB0514 Marker 80.2 (cM) Automated name-based View Maps
MUSB0194 Marker 56.57 Cotton - HDC - 2 MUSB0194 Marker 61.8 (cM) Automated name-based View Maps
Gh198 Marker 55.98 Cotton - HDC - 2 Gh198 Marker 61.2 (cM) Automated name-based View Maps
Cotton - E3 - 2 Gh198 Marker 80 (cM) Automated name-based View Maps
TMB1025 Marker 55.41 Cotton - Graimondii_physical - Gr_Chr03 TMB1025 Marker Cotton 2,989,290 - 2,989,990 (bp) Automated name-based View Maps
Cotton - T3 - 3 TMB1025 Marker 38.34 (cM) Automated name-based View Maps
Cotton - HDC - 2 TMB1025 Marker 60.7 (cM) Automated name-based View Maps
Cotton - HDC - 3 TMB1025 Marker 47.7 (cM) Automated name-based View Maps
MUSB0888 Marker 54.66 Cotton - Graimondii_physical - Gr_Chr04 MUSB0888 Marker Cotton 622,142 - 622,869 (bp) Automated name-based View Maps
Cotton - HDC - 2 MUSB0888 Marker 60 (cM) Automated name-based View Maps
MUSB1178 Marker 53.92 Cotton - HDC - 2 MUSB1178 Marker 59.3 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB1178 Marker 47.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB1178a Marker 38.45 (cM) Automated name-based View Maps
MUSB0958 Marker 53.27 Cotton - HDC - 1 MUSB0958 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB0958 Marker 3.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0958a Marker 37.63 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MUSB0958e Marker 25.11 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSB0958 Marker 70.8 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0958g Marker 46.62 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0958 Marker 47.4 (cM) Automated name-based View Maps
Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0958 Marker 108.6 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
Cotton - T3 - 9 MUSB0958 Marker 110.44 (cM) Automated name-based View Maps
Cotton - HDC - 9 MUSB0958 Marker 46.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0958 Marker 63.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0958 Marker 58.8 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0958d Marker 39.08 (cM) Automated name-based View Maps
Cotton - HDC - 10 MUSB0958 Marker 107.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MUSB0958b Marker 56.75 (cM) Automated name-based View Maps
UCcg10798_80 Marker 52.58 Cotton - HDC - 2 UCcg10798_80 Marker 58.1 (cM) Automated name-based View Maps
MUSS073 Marker 51.92 Cotton - E3 - 2 MUSS073 Marker 80.7 (cM) Automated name-based View Maps
Cotton - HDC - 17 MUSS073 Marker 67.5 (cM) Automated name-based View Maps
Cotton - T3 - 17 MUSS073 Marker 46.74 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSS073 Marker 57.4 (cM) Automated name-based View Maps
MUSS114 Marker 51.08 Cotton - HDC - 17 MUSS114 Marker 63.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSS114 Marker 56.5 (cM) Automated name-based View Maps
Cotton - T3 - 17 MUSS114 Marker 51.22 (cM) Automated name-based View Maps
MUSB0749 Marker 49.82 Cotton - Guazuncho2xVH8-RIL - c2 MUSB0749 Marker 39.13 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0749 Marker 46.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 MUSB0749 Marker Cotton 52,041,922 - 52,043,121 (bp) Automated name-based View Maps
Cotton - HDC - 2 MUSB0749 Marker 61.5 (cM) Automated name-based View Maps
TMB2905 Marker 49.21 Cotton - HDC - 2 TMB2905 Marker 54.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB2905 Marker Cotton 27,729,802 - 27,730,281 (bp) Automated name-based View Maps
TMB1194 Marker 48.75 Cotton - HDC - 2 TMB1194 Marker 54.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB1194 Marker Cotton 23,637,588 - 23,637,816 (bp) Automated name-based View Maps