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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
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Feature Types:
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Correspondence		 Always Display
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 116.37 cM
Features by Type:
88 Marker
88 Total

Map Features

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Items 1 to 25 of 88.       of 4 | Next
Cotton - T3 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CIR347 Marker 95.5 Cotton - T3 - 17 CIR347 Marker 13.88 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 CIR347 Marker Cotton 42,298,424 - 42,298,687 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR347 Marker 4 (cM) Automated name-based View Maps
Cotton - HDC - 3 CIR347 Marker 111 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR347 Marker 5.5 (cM) Automated name-based View Maps
Cotton - HDC - 17 CIR347 Marker 96.5 (cM) Automated name-based View Maps
NAU1167 Marker 97.45 Cotton - CH - 17 NAU1167 Marker 25 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU1324 Marker 113 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1167 Marker 63.5 (cM) Automated name-based View Maps
UCcot10137_405 Marker 0 Cotton - HDC - 3 UCcot10137_405 Marker 9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcot10137_405 Marker Cotton 62,620,971 - 62,621,073 (bp) Automated name-based View Maps
UCcot10105_151 Marker 110.03 Cotton - HDC - 3 UCcot10105_151 Marker 125.5 (cM) Automated name-based View Maps
TMB0836 Marker 3.23 Cotton - T3 - 14 TMB0836 Marker 11.68 (cM) Automated name-based View Maps
Cotton - HDC - 14 TMB0836 Marker 11.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 TMB0836 Marker Cotton 3,869,153 - 3,869,742 (bp) Automated name-based View Maps
Cotton - HDC - 3 TMB0836 Marker 12.2 (cM) Automated name-based View Maps
MUCS547 Marker 116.37 Cotton - HDC - 3 CLU511 Marker 131.9 (cM) Automated name-based View Maps
Cotton - E3 - 3 MUCS547 Marker 27.9 (cM) Automated name-based View Maps
NAU0862 Marker 8.74 Cotton - GVc - 3 NAU0862 Marker 106.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 NAU0862b Marker 70.42 (cM) Automated name-based View Maps
Cotton - HDC - 3 NAU0862 Marker 17.7 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU0862 Marker 71.3 (cM) Automated name-based View Maps
CM129 Marker 9.6 Cotton - HDC - 3 CM129 Marker 19 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CM129 Marker Cotton 39,013,473 - 39,014,043 (bp) Automated name-based View Maps
UCcg11306_322 Marker 10.24 Cotton - HDC - 3 UCcg11306_322 Marker 19.8 (cM) Automated name-based View Maps
CIR228 Marker 10.81 Cotton - GVc - 3 CIR228 Marker 102.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 CIR228 Marker Cotton 62,635,964 - 62,636,211 (bp) Automated name-based View Maps
Cotton - HDC - 3 CIR228 Marker 20.6 (cM) Automated name-based View Maps
Cotton - E3 - 3 CIR228 Marker 153.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR228 Marker 137.3 (cM) Automated name-based View Maps
Cotton - T3 - 14 CIR228 Marker 17.81 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 CIR228a Marker 76.65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 CIR228b Marker 88.01 (cM) Automated name-based View Maps
Cotton - HDC - 14 CIR228 Marker 21 (cM) Automated name-based View Maps
Cotton - CH - 3 CIR228 Marker 79.8 (cM) Automated name-based View Maps
Cotton - GVc - 14 CIR228 Marker 107 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 CIR228 Marker 167.2 (cM) Automated name-based View Maps
UCcg11217_636 Marker 14.94 Cotton - HDC - 3 UCcg11217_636 Marker 22.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcg11217_636 Marker Cotton 62,371,280 - 62,371,382 (bp) Automated name-based View Maps
JESPR231 Marker 15.99 Cotton - HDC - 14 JESPR231 Marker 24.9 (cM) Automated name-based View Maps
Cotton - E3 - 3 JESPR231 Marker 143.2 (cM) Automated name-based View Maps
Cotton - GVc - 3 JESPR231 Marker 100.7 (cM) Automated name-based View Maps
Cotton - T3 - 14 JESPR231 Marker 22.13 (cM) Automated name-based View Maps
Cotton - TH - 3 JESPR231 Marker 57.7 (cM) Automated name-based View Maps
Cotton - CH - 3 JESPR231 Marker 88.5 (cM) Automated name-based View Maps
Cotton - GVc - 14 JESPR231 Marker 104.6 (cM) Automated name-based View Maps
Cotton - HDC - 3 JESPR231 Marker 22.9 (cM) Automated name-based View Maps
Cotton - CH - 14 JESPR231 Marker 175.2 (cM) Automated name-based View Maps
Cotton - HDC - 14 JESPR231 Marker 25.1 (cM) Automated name-based View Maps
Cotton - CH - 14 JESPR231 Marker 175.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 JESPR231 Marker 134.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 JESPR231 Marker 160.6 (cM) Automated name-based View Maps
BNL3259 Marker 20.59 Cotton - Guazuncho2xVH8-BC1 - c14 BNL3259 Marker 160.6 (cM) Automated name-based View Maps
Cotton - HDC - 3 BNL3259 Marker 30 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 BNL3259b Marker 81.01 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3259 Marker 109.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3259 Marker 96.9 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3259 Marker 29.2 (cM) Automated name-based View Maps
Cotton - GVc - 14 BNL3259 Marker 99.6 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL3259 Marker 54.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3259a Marker 61.12 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3259 Marker 73.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c14 BNL3259 Marker 136.7 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3259 Marker 91.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL3259 Marker 29.37 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL3259 Marker 167 (cM) Automated name-based View Maps
Gh210 Marker 22.22 Cotton - Graimondii_physical - Gr_Chr03 Gh210 Marker Cotton 37,600,545 - 37,601,263 (bp) Automated name-based View Maps
Cotton - E3 - 3 Gh210 Marker 128.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 Gh210 Marker 31.6 (cM) Automated name-based View Maps
UCD289 Marker 35.31 Cotton - HDC - 3 UCD289 Marker 45.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 UCD289 Marker 44.98 (cM) Automated name-based View Maps
Cotton - HDC - 14 UCD289 Marker 43 (cM) Automated name-based View Maps
NAU1070 Marker 35.47 Cotton - HDC - 3 NAU1070 Marker 45.4 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU1070 Marker 15 (cM) Automated name-based View Maps
Cotton - TH - 3 NAU1070 Marker 27.8 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU1070 Marker 24.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU1070 Marker Cotton 58,987,292 - 58,987,936 (bp) Automated name-based View Maps
Cotton - T3 - 14 NAU1070 Marker 44.59 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU1070 Marker 42.6 (cM) Automated name-based View Maps
CIR332 Marker 36.85 Cotton - Graimondii_physical - Gr_Chr05 CIR332 Marker Cotton 5,247,490 - 5,248,051 (bp) Automated name-based View Maps
Cotton - HDC - 3 CIR332 Marker 46.8 (cM) Automated name-based View Maps
Cotton - GVc - 3 CIR332 Marker 74 (cM) Automated name-based View Maps
Cotton - TH - 3 CIR332 Marker 14.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 CIR332 Marker 95.8 (cM) Automated name-based View Maps
MUSS162 Marker 37.02 Cotton - TH - 3 MUSS162 Marker 15.1 (cM) Automated name-based View Maps
Cotton - E3 - 3 MUSS162 Marker 110.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 MUSS162 Marker Cotton 58,754,606 - 58,755,086 (bp) Automated name-based View Maps
Cotton - HDC - 3 MUSS162 Marker 46.9 (cM) Automated name-based View Maps
MUCS407 Marker 37.56 Cotton - HDC - 14 CLU2785 Marker 44.5 (cM) Automated name-based View Maps
Cotton - HDC - 3 CLU2785 Marker 47.5 (cM) Automated name-based View Maps
Cotton - T3 - 14 MUCS407 Marker 46.65 (cM) Automated name-based View Maps
UCD235 Marker 37.62 Cotton - HDC - 3 UCD235 Marker 47.3 (cM) Automated name-based View Maps
Cotton - HDC - 14 UCD235 Marker 44.7 (cM) Automated name-based View Maps
Cotton - T3 - 14 UCD235 Marker 46.85 (cM) Automated name-based View Maps
NAU0998 Marker 37.71 Cotton - Graimondii_physical - Gr_Chr05 NAU0998 Marker Cotton 58,423,493 - 58,424,160 (bp) Automated name-based View Maps
Cotton - HDC - 3 NAU0998 Marker 47.3 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU0998 Marker 44.4 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU0998 Marker 49.1 (cM) Automated name-based View Maps
Cotton - T3 - 14 NAU0998 Marker 46.55 (cM) Automated name-based View Maps
TMB1025 Marker 38.34 Cotton - HDC - 2 TMB1025 Marker 60.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 TMB1025 Marker Cotton 2,989,290 - 2,989,990 (bp) Automated name-based View Maps
Cotton - HDC - 3 TMB1025 Marker 47.7 (cM) Automated name-based View Maps
Cotton - T3 - 2 TMB1025 Marker 55.41 (cM) Automated name-based View Maps
BNL4017 Marker 39.66 Cotton - Graimondii_physical - Gr_Chr05 BNL4017 Marker Cotton 57,765,851 - 57,766,234 (bp) Automated name-based View Maps
Cotton - HDC - 3 BNL4017 Marker 48.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL4017 Marker 45.4 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL4017 Marker 110.6 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL4017 Marker 47.69 (cM) Automated name-based View Maps
UCcg11090_504 Marker 39.84 Cotton - HDC - 3 UCcg11090_504 Marker 48.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 UCcg11090_504 Marker Cotton 57,649,725 - 57,649,827 (bp) Automated name-based View Maps
BNL1080 Marker 40.14 Cotton - HDC - 3 BNL1080 Marker 48.7 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL1080 Marker 121.7 (cM) Automated name-based View Maps