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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
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Stack
Maps 4
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 101.58 cM
Features by Type:
53 Marker
53 Total

Map Features

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Items 1 to 25 of 53.       of 3 | Next
Cotton - T3 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TMB1648 Marker 101.58 Cotton - HDC - 4 TMB1648 Marker 100.4 (cM) Automated name-based View Maps
Cotton - HDC - 22 TMB1648 Marker 97.2 (cM) Automated name-based View Maps
Cotton - T3 - 22 TMB1648 Marker 105.36 (cM) Automated name-based View Maps
Cotton - E3 - 22 TMB1648 Marker 28.9 (cM) Automated name-based View Maps
UCcg11329_228 Marker 100.82 Cotton - HDC - 4 UCcg11329_228 Marker 99.6 (cM) Automated name-based View Maps
CIR091 Marker 84.95 Cotton - HDC - 4 CIR091 Marker 83.7 (cM) Automated name-based View Maps
BNL2572 Marker 82.71 Cotton - Guazuncho2xVH8-RIL - c4 BNL2572 Marker 8.87 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL2572 Marker 81.5 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL2572 Marker 12.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL2572 Marker 52.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL2572 Marker Cotton 32,796,523 - 32,796,809 (bp) Automated name-based View Maps
Cotton - CH - 4 BNL2572 Marker 32.6 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL2572 Marker 95.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL2572 Marker 0 (cM) Automated name-based View Maps
MUSB0117 Marker 81.63 Cotton - HDC - 4 MUSB0117 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 MUSB0117 Marker Cotton 32,497,747 - 32,498,404 (bp) Automated name-based View Maps
DPL0451 Marker 77.77 Cotton - HDC - 4 DPL0451 Marker 75.1 (cM) Automated name-based View Maps
Cotton - E3 - 4 DPL0451 Marker 55.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 DPL0451 Marker Cotton 32,368,710 - 32,369,498 (bp) Automated name-based View Maps
NAU2477 Marker 77.6 Cotton - T3 - 22 NAU2477 Marker 81.94 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU2477 Marker 83.6 (cM) Automated name-based View Maps
Cotton - TH - 22 NAU2477 Marker 69.1 (cM) Automated name-based View Maps
NAU2162 Marker 77.19 Cotton - HDC - 4 CLU3843 Marker 74.3 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU2162 Marker 81.83 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3843 Marker 77.5 (cM) Automated name-based View Maps
UCD108 Marker 76.64 Cotton - HDC - 4 UCD108 Marker 73.9 (cM) Automated name-based View Maps
Cotton - HDC - 22 UCD108 Marker 77.8 (cM) Automated name-based View Maps
Cotton - T3 - 22 UCD108 Marker 81.73 (cM) Automated name-based View Maps
UCD120 Marker 76.45 Cotton - HDC - 4 UCD120 Marker 73.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 UCD120 Marker 77.5 (cM) Automated name-based View Maps
Cotton - T3 - 22 UCD120 Marker 81.58 (cM) Automated name-based View Maps
UCD216 Marker 76.02 Cotton - HDC - 22 UCD216 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 UCD216 Marker 73.4 (cM) Automated name-based View Maps
Cotton - T3 - 22 UCD216 Marker 82.19 (cM) Automated name-based View Maps
MUSS145 Marker 75.72 Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU743 Marker 74.8 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU743 Marker 76.7 (cM) Automated name-based View Maps
Cotton - T3 - 22 MUSS145 Marker 81.97 (cM) Automated name-based View Maps
HAU0086 Marker 75.53 Cotton - E3 - 22 HAU0086 Marker 60 (cM) Automated name-based View Maps
Cotton - E3 - 4 HAU0086 Marker 53.8 (cM) Automated name-based View Maps
Cotton - T3 - 22 HAU0086 Marker 82.07 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 HAU0086 Marker Cotton 32,303,880 - 32,304,574 (bp) Automated name-based View Maps
Cotton - HDC - 22 HAU0086 Marker 77.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 4 HAU0086 Marker 73 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
NAU2291 Marker 75.38 Cotton - HDC - 4 CLU3843 Marker 74.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 NAU2291a Marker 22.68 (cM) Automated name-based View Maps
Cotton - T3 - 22 NAU2291 Marker 81.83 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 NAU2291b Marker 16.93 (cM) Automated name-based View Maps
Cotton - E3 - 22 NAU2291 Marker 57.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU3843 Marker 77.5 (cM) Automated name-based View Maps
Cotton - GVc - 22 NAU2291 Marker 22.5 (cM) Automated name-based View Maps
Cotton - GVc - 4 NAU2291 Marker 20.9 (cM) Automated name-based View Maps
HAU0087 Marker 75.2 Cotton - HDC - 22 HAU0087 Marker 77.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU743 Marker 76.7 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU619 Marker 73.1 (cM) Automated name-based View Maps
Cotton - HDC - 4 CLU743 Marker 74.8 (cM) Automated name-based View Maps
Cotton - T3 - 22 HAU0087 Marker 81.78 (cM) Automated name-based View Maps
Cotton - HDC - 4 HAU0087 Marker 72.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 CLU619 Marker 77.5 (cM) Automated name-based View Maps
DPL0494 Marker 73.47 Cotton - HDC - 4 DPL0494 Marker 71.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 DPL0494 Marker Cotton 32,148,417 - 32,148,936 (bp) Automated name-based View Maps
Cotton - E3 - 4 DPL0494 Marker 59.7 (cM) Automated name-based View Maps
TMB2011 Marker 71.11 Cotton - HDC - 4 TMB2011 Marker 69.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 TMB2011 Marker Cotton 31,744,244 - 31,744,886 (bp) Automated name-based View Maps
JESPR223 Marker 67.88 Cotton - HDC - 4 CLU140 Marker 66.9 (cM) Automated name-based View Maps
Cotton - E3 - 4 JESPR223 Marker 63.2 (cM) Automated name-based View Maps
Gh117 Marker 64.39 Cotton - HDC - 4 Gh117 Marker 64.1 (cM) Automated name-based View Maps
Cotton - E3 - 4 Gh117 Marker 68.1 (cM) Automated name-based View Maps
BNL0530 Marker 61.45 Cotton - Graimondii_physical - Gr_Chr12 BNL0530 Marker Cotton 28,958,470 - 28,958,747 (bp) Automated name-based View Maps
Cotton - CH - 22 BNL0530 Marker 50.1 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL0530 Marker 30.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL530 Marker 74 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL0530 Marker 61.8 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL0530 Marker 68.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL530 Marker 18 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL0530 Marker 72.3 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL0530 Marker 64.9 (cM) Automated name-based View Maps
DPL0085 Marker 59.91 Cotton - HDC - 4 CLU51 Marker 60.3 (cM) Automated name-based View Maps
DPL0667 Marker 58.43 Cotton - HDC - 4 DPL0667 Marker 58.9 (cM) Automated name-based View Maps
Cotton - E3 - 4 DPL0667 Marker 72.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 DPL0667 Marker Cotton 46,622,560 - 46,623,085 (bp) Automated name-based View Maps
UCcg11425_194 Marker 58.09 Cotton - HDC - 4 UCcg11425_194 Marker 58.6 (cM) Automated name-based View Maps
MUSS284 Marker 56.81 Cotton - HDC - 4 CLU829 Marker 57.4 (cM) Automated name-based View Maps
UCcgs10021_229 Marker 56.3 Cotton - Graimondii_physical - Gr_Chr12 UCcgs10021_229 Marker Cotton 28,582,516 - 28,582,618 (bp) Automated name-based View Maps
Cotton - HDC - 4 UCcgs10021_229 Marker 56.9 (cM) Automated name-based View Maps