CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-T3
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 199.19 cM
Features by Type:
135 Marker
135 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 135.       of 6 | Next
Cotton - T3 - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
UCcgs10046_302 Marker 137.72 Cotton - HDC - 5 UCcgs10046_302 Marker 37.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 UCcgs10046_302 Marker Cotton 9,168,160 - 9,168,262 (bp) Automated name-based View Maps
UCcg11211_484 Marker 44.68 Cotton - Graimondii_physical - Gr_Chr09 UCcg11211_484 Marker Cotton 7,455,596 - 7,455,698 (bp) Automated name-based View Maps
Cotton - HDC - 5 UCcg11211_484 Marker 108.2 (cM) Automated name-based View Maps
JESPR065 Marker 140.19 Cotton - HDC - 21 JESPR065 Marker 156.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR065 Marker 34.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR065 Marker 137.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 JESPR065 Marker 287.8 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR065 Marker 27.3 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR065 Marker 55.4 (cM) Automated name-based View Maps
Cotton - GVc - 5 JESPR065 Marker 108.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 JESPR065b Marker 87.45 (cM) Automated name-based View Maps
Cotton - GVc - 22 JESPR065 Marker 73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 JESPR065d Marker 59.76 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 JESPR065 Marker 108.2 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR065 Marker 33.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR065c Marker 32.03 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c21 JESPR065a Marker 6.62 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR065 Marker 59.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 JESPR065 Marker 15.2 (cM) Automated name-based View Maps
Cotton - HDC - 7 JESPR065 Marker 88.9 (cM) Automated name-based View Maps
Cotton - TH - 5 JESPR065 Marker 166.5 (cM) Automated name-based View Maps
Cotton - GVc - 21 JESPR065 Marker 17.7 (cM) Automated name-based View Maps
UCcg10490_49 Marker 45.4 Cotton - HDC - 5 UCcg10490_49 Marker 107.9 (cM) Automated name-based View Maps
MUSB1035 Marker 141.68 Cotton - GVc - 14 MUSB1035 Marker 57.5 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSB1035 Marker 118.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSB1035y Marker 55.43 (cM) Automated name-based View Maps
Cotton - HDC - 12 MUSB1035 Marker 43.9 (cM) Automated name-based View Maps
Cotton - GVc - 25 MUSB1035 Marker 80.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 MUSB1035 Marker 149.1 (cM) Automated name-based View Maps
Cotton - GVc - 12 MUSB1035 Marker 102.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 MUSB1035v Marker 76.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 MUSB1035t Marker 38.27 (cM) Automated name-based View Maps
Cotton - HDC - 25 MUSB1035 Marker 73 (cM) Automated name-based View Maps
Cotton - GVc - 5 MUSB1035 Marker 92.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 MUSB1035 Marker 51.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 MUSB1035s Marker 53.47 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 MUSB1035z Marker 44.25 (cM) Automated name-based View Maps
Cotton - HDC - 14 MUSB1035 Marker 77.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB1035 Marker Cotton 32,261,219 - 32,262,407 (bp) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 49.1 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB1035 Marker 155.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 30.1 (cM) Automated name-based View Maps
UCcg10490_331 Marker 45.53 Cotton - HDC - 5 UCcg10490_331 Marker 107.9 (cM) Automated name-based View Maps
Gh262 Marker 142.15 Cotton - E3 - 5 Gh262 Marker 201.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 Gh262 Marker 33.3 (cM) Automated name-based View Maps
UCcg11000_346 Marker 47.44 Cotton - HDC - 5 UCcg11000_346 Marker 107.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 UCcg11000_346 Marker Cotton 8,079,860 - 8,079,962 (bp) Automated name-based View Maps
MUSB1035 Marker 148.61 Cotton - HDC - 14 MUSB1035 Marker 77.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 MUSB1035 Marker Cotton 32,261,219 - 32,262,407 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 MUSB1035z Marker 44.25 (cM) Automated name-based View Maps
Cotton - HDC - 11 MUSB1035 Marker 155.7 (cM) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 30.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 MUSB1035 Marker 49.1 (cM) Automated name-based View Maps
Cotton - GVc - 5 MUSB1035 Marker 92.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 MUSB1035 Marker 51.4 (cM) Automated name-based View Maps
Cotton - HDC - 25 MUSB1035 Marker 73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c14 MUSB1035s Marker 53.47 (cM) Automated name-based View Maps
Cotton - GVc - 12 MUSB1035 Marker 102.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 MUSB1035v Marker 76.27 (cM) Automated name-based View Maps
Cotton - GVc - 25 MUSB1035 Marker 80.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 MUSB1035 Marker 149.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c25 MUSB1035t Marker 38.27 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 MUSB1035y Marker 55.43 (cM) Automated name-based View Maps
Cotton - T3 - 11 MUSB1035 Marker 118.68 (cM) Automated name-based View Maps
Cotton - HDC - 12 MUSB1035 Marker 43.9 (cM) Automated name-based View Maps
Cotton - GVc - 14 MUSB1035 Marker 57.5 (cM) Automated name-based View Maps
DPL0241 Marker 49.53 Cotton - Graimondii_physical - Gr_Chr09 DPL0241 Marker Cotton 8,796,808 - 8,797,640 (bp) Automated name-based View Maps
Cotton - HDC - 5 DPL0241 Marker 106.7 (cM) Automated name-based View Maps
UCcg11343_68 Marker 153.2 Cotton - HDC - 5 UCcg11343_68 Marker 27.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 UCcg11343_68 Marker Cotton 6,230,817 - 6,230,919 (bp) Automated name-based View Maps
UCcg11211_413 Marker 50.4 Cotton - HDC - 5 UCcg11211_413 Marker 106.4 (cM) Automated name-based View Maps
CIR185 Marker 153.79 Cotton - CH - 5 CIR185 Marker 61.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 CIR185 Marker 27.3 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR185 Marker 113.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR185 Marker 290.9 (cM) Automated name-based View Maps
Cotton - E3 - 5 CIR185 Marker 176.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR185 Marker 92.05 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CIR185 Marker Cotton 6,070,567 - 6,070,757 (bp) Automated name-based View Maps
NAU1042 Marker 51.59 Cotton - T3 - 19 NAU1042 Marker 63.45 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 56.4 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 129 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 NAU1042a Marker 25.1 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU216 Marker 126.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 CLU216 Marker 119.4 (cM) Automated name-based View Maps
Cotton - HDC - 5 CLU216 Marker 106 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1042 Marker 128.2 (cM) Automated name-based View Maps
Cotton - TH - 19 NAU1042 Marker 69.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1042 Marker 115.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 NAU1042 Marker 92.5 (cM) Automated name-based View Maps
Cotton - GVc - 19 NAU1042 Marker 75.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 NAU1042b Marker 35.84 (cM) Automated name-based View Maps
Cotton - TH - 5 NAU1042 Marker 68.3 (cM) Automated name-based View Maps
JESPR050 Marker 154.07 Cotton - TH - 5 JESPR050 Marker 169.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR050 Marker 36.7 (cM) Automated name-based View Maps
Cotton - T3 - 22 JESPR050 Marker 27.32 (cM) Automated name-based View Maps
Cotton - E3 - 5 JESPR050 Marker 177.5 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR050 Marker 34.5 (cM) Automated name-based View Maps
Cotton - HDC - 5 JESPR050 Marker 27.2 (cM) Automated name-based View Maps
NAU1221 Marker 52.04 Cotton - T3 - 19 NAU1221 Marker 62.86 (cM) Automated name-based View Maps
Cotton - HDC - 19 NAU1221 Marker 119.6 (cM) Automated name-based View Maps
Cotton - CH - 19 NAU1221 Marker 128 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU1221 Marker 105.8 (cM) Automated name-based View Maps
CM65 Marker 154.69 Cotton - E3 - 5 CM65 Marker 176.8 (cM) Automated name-based View Maps
Cotton - HDC - 5 CM65 Marker 26.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 CM65 Marker Cotton 5,767,443 - 5,767,829 (bp) Automated name-based View Maps
DOW084 Marker 53.72 Cotton - HDC - 5 DOW084 Marker 105.3 (cM) Automated name-based View Maps
TMB0770 Marker 155.7 Cotton - Graimondii_physical - Gr_Chr12 TMB0770 Marker Cotton 5,578,157 - 5,578,678 (bp) Automated name-based View Maps
Cotton - HDC - 5 TMB0770 Marker 26.3 (cM) Automated name-based View Maps
UCcg10604_117 Marker 55.16 Cotton - Graimondii_physical - Gr_Chr09 UCcg10604_117 Marker Cotton 12,040,599 - 12,040,701 (bp) Automated name-based View Maps
Cotton - HDC - 5 UCcg10604_117 Marker 104.9 (cM) Automated name-based View Maps
BNL4030 Marker 156.51 Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
Cotton - HDC - 5 BNL4030 Marker 25.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 BNL4030 Marker Cotton 5,740,007 - 5,740,438 (bp) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 124.9 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 77.5 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 57.5 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL4030 Marker 24.8 (cM) Automated name-based View Maps
NAU0922 Marker 56.18 Cotton - TH - 5 NAU0922 Marker 63.3 (cM) Automated name-based View Maps
Cotton - HDC - 5 NAU0922 Marker 104.5 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU0922 Marker 67.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU922 Marker 92 (cM) Automated name-based View Maps
Cotton - HDC - 11 NAU0922 Marker 18.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 NAU922 Marker 235 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU0922 Marker 74.1 (cM) Automated name-based View Maps
Cotton - GVc - 11 NAU0922 Marker 227.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 NAU0922 Marker Cotton 10,824,213 - 10,825,057 (bp) Automated name-based View Maps
Cotton - GVc - 5 NAU0922 Marker 74.8 (cM) Automated name-based View Maps
HAU0042 Marker 158.84 Cotton - E3 - 5 HAU0042 Marker 169.1 (cM) Automated name-based View Maps
Cotton - HDC - 5 HAU0042 Marker 23.4 (cM) Automated name-based View Maps
DPL0177 Marker 57.18 Cotton - Graimondii_physical - Gr_Chr09 DPL0177 Marker Cotton 10,892,560 - 10,893,363 (bp) Automated name-based View Maps
Cotton - HDC - 5 DPL0177 Marker 104.2 (cM) Automated name-based View Maps
Gh260 Marker 161.43 Cotton - HDC - 5 Gh260 Marker 20.8 (cM) Automated name-based View Maps