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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-T3
(Reference Set)
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Correspondences
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Maps 9
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - T3 [ View Map Set Info ]
Map Name: 9
Map Start: 0 cM
Map Stop: 139.43 cM
Features by Type:
98 Marker
98 Total

Map Features

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Items 1 to 25 of 98.       of 4 | Next
Cotton - T3 - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL1672 Marker 91.51 Cotton - Guazuncho2xVH8-BC1 - c9 BNL1672 Marker 118 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU15 Marker 82.2 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 49.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 60.4 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL1672 Marker 71.8 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL1672 Marker 91.64 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL1672 Marker 50.6 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL1672 Marker 124.8 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL1672 Marker 57.5 (cM) Automated name-based View Maps
Cotton - E3 - 23 BNL1672 Marker 65.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL1672 Marker 117.7 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL1672 Marker 115.8 (cM) Automated name-based View Maps
MUSS316 Marker 94.3 Cotton - HDC - 9 CLU552 Marker 55.9 (cM) Automated name-based View Maps
BNL3779 Marker 94.88 Cotton - CH - 9 BNL3779 Marker 132.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL3779 Marker 57.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL3779 Marker 114.8 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL3779 Marker 67.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL3779 Marker 34.38 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3779 Marker Cotton 33,151,476 - 33,151,976 (bp) Automated name-based View Maps
Cotton - TH - 9 BNL3779 Marker 57.1 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL3779 Marker 47.3 (cM) Automated name-based View Maps
MUCS325 Marker 96.74 Cotton - HDC - 9 CLU552 Marker 55.9 (cM) Automated name-based View Maps
TMB2920 Marker 99.78 Cotton - E3 - 9 TMB2920 Marker 55.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 TMB2920 Marker Cotton 30,531,469 - 30,532,198 (bp) Automated name-based View Maps
Cotton - HDC - 9 TMB2920 Marker 53.9 (cM) Automated name-based View Maps
DOW076 Marker 101.49 Cotton - HDC - 9 DOW076 Marker 52.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 DOW076 Marker Cotton 31,189,961 - 31,190,217 (bp) Automated name-based View Maps
DOW037 Marker 102.25 Cotton - HDC - 9 DOW037 Marker 52.3 (cM) Automated name-based View Maps
TMB0815 Marker 103.69 Cotton - Graimondii_physical - Gr_Chr07 TMB0815 Marker Cotton 374,155 - 374,716 (bp) Automated name-based View Maps
Cotton - HDC - 9 TMB0815 Marker 51.3 (cM) Automated name-based View Maps
TMB0184 Marker 104.32 Cotton - HDC - 9 TMB0184 Marker 50.9 (cM) Automated name-based View Maps
UCcg10978_410 Marker 104.32 Cotton - HDC - 9 UCcg10978_410 Marker 51.4 (cM) Automated name-based View Maps
HAU0045 Marker 105.86 Cotton - T3 - 23 HAU0045 Marker 102.29 (cM) Automated name-based View Maps
Cotton - HDC - 9 HAU0045 Marker 49.9 (cM) Automated name-based View Maps
Cotton - HDC - 23 HAU0045 Marker 71.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 HAU0045 Marker Cotton 30,403,172 - 30,404,040 (bp) Automated name-based View Maps
NAU2200 Marker 106.09 Cotton - TH - 23 NAU2200 Marker 59.2 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU3861 Marker 49.7 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU3861 Marker 71.8 (cM) Automated name-based View Maps
Cotton - T3 - 23 NAU2200 Marker 102.3 (cM) Automated name-based View Maps
BNL3874 Marker 106.59 Cotton - Graimondii_physical - Gr_Chr10 BNL3874 Marker Cotton 58,410,543 - 58,410,937 (bp) Automated name-based View Maps
Cotton - HDC - 9 BNL3874 Marker 49.3 (cM) Automated name-based View Maps
NAU0859 Marker 107.07 Cotton - Graimondii_physical - Gr_Chr06 NAU0859 Marker Cotton 30,093,234 - 30,093,901 (bp) Automated name-based View Maps
Cotton - HDC - 9 NAU0859 Marker 49 (cM) Automated name-based View Maps
Cotton - TH - 9 NAU0859 Marker 48.6 (cM) Automated name-based View Maps
DPL0507 Marker 107.75 Cotton - HDC - 9 DPL0507 Marker 48.6 (cM) Automated name-based View Maps
MUSB0969 Marker 109.55 Cotton - HDC - 9 MUSB0969 Marker 47.4 (cM) Automated name-based View Maps
MUSB0958 Marker 110.44 Cotton - GVc - 9 MUSB0958 Marker 41.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 MUSB0958 Marker 107.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 MUSB0958b Marker 56.75 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 MUSB0958e Marker 25.11 (cM) Automated name-based View Maps
Cotton - HDC - 8 MUSB0958 Marker 108.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 MUSB0958a Marker 37.63 (cM) Automated name-based View Maps
Cotton - HDC - 9 MUSB0958 Marker 46.8 (cM) Automated name-based View Maps
Cotton - T3 - 10 MUSB0958 Marker 82.33 (cM) Automated name-based View Maps
Cotton - GVc - 2 MUSB0958 Marker 47.4 (cM) Automated name-based View Maps
Cotton - T3 - 1 MUSB0958 Marker 60.66 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 MUSB0958d Marker 39.08 (cM) Automated name-based View Maps
Cotton - HDC - 2 MUSB0958 Marker 58.8 (cM) Automated name-based View Maps
Cotton - GVc - 13 MUSB0958 Marker 89.1 (cM) Automated name-based View Maps
Cotton - T3 - 2 MUSB0958 Marker 53.27 (cM) Automated name-based View Maps
Cotton - GVc - 8 MUSB0958 Marker 122.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 MUSB0958 Marker 3.9 (cM) Automated name-based View Maps
Cotton - GVc - 1 MUSB0958 Marker 70.8 (cM) Automated name-based View Maps
Cotton - HDC - 13 MUSB0958 Marker 63.1 (cM) Automated name-based View Maps
Cotton - HDC - 1 MUSB0958 Marker 73 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 MUSB0958g Marker 46.62 (cM) Automated name-based View Maps
Cotton - T3 - 16 MUSB0958 Marker 124.44 (cM) Automated name-based View Maps
Gh697 Marker 111.12 Cotton - HDC - 13 Gh697 Marker 34.9 (cM) Automated name-based View Maps
Cotton - HDC - 9 Gh697 Marker 45.9 (cM) Automated name-based View Maps
Cotton - E3 - 13 Gh697 Marker 157.3 (cM) Automated name-based View Maps
MUSB0087 Marker 112.21 Cotton - Graimondii_physical - Gr_Chr02 MUSB0087 Marker Cotton 62,169,212 - 62,169,781 (bp) Automated name-based View Maps
Cotton - HDC - 9 MUSB0087 Marker 44.6 (cM) Automated name-based View Maps
MUSB0907 Marker 112.66 Cotton - HDC - 9 MUSB0907 Marker 44.2 (cM) Automated name-based View Maps
Cotton - E3 - 9 MUSB0907 Marker 43.5 (cM) Automated name-based View Maps
MUSB0995 Marker 113.07 Cotton - HDC - 9 MUSB0995 Marker 43.7 (cM) Automated name-based View Maps
BNL1423 Marker 113.25 Cotton - Guazuncho2xVH8-BC1 - c9 BNL1423 Marker 31.6 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL1423 Marker 163.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL1423 Marker 43.4 (cM) Automated name-based View Maps
Cotton - PK - c9 BNL1423 Marker 30.4 (cM) Automated name-based View Maps
TMB0244 Marker 113.54 Cotton - Graimondii_physical - Gr_Chr06 TMB0244 Marker Cotton 17,485,593 - 17,486,174 (bp) Automated name-based View Maps
Cotton - HDC - 9 TMB0244 Marker 43.1 (cM) Automated name-based View Maps
JESPR274 Marker 114.33 Cotton - TH - 9 JESPR274 Marker 41.5 (cM) Automated name-based View Maps
Cotton - T3 - 23 JESPR274 Marker 104.97 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR274 Marker 30.3 (cM) Automated name-based View Maps
Cotton - TH - 23 JESPR274 Marker 52.5 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR274 Marker 69.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR274 Marker 42.1 (cM) Automated name-based View Maps
Cotton - CH - 23 JESPR274 Marker 130.6 (cM) Automated name-based View Maps
Cotton - E3 - 23 JESPR274 Marker 55 (cM) Automated name-based View Maps
Cotton - TH - 9 JESPR274 Marker 13.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 JESPR274 Marker Cotton 45,440,347 - 45,440,605 (bp) Automated name-based View Maps
JESPR247 Marker 114.47 Cotton - HDC - 6 JESPR247 Marker 92.8 (cM) Automated name-based View Maps
Cotton - T3 - 23 JESPR247 Marker 104.78 (cM) Automated name-based View Maps
Cotton - E3 - 6 JESPR247 Marker 89 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR247 Marker 70 (cM) Automated name-based View Maps
Cotton - HDC - 9 JESPR247 Marker 42 (cM) Automated name-based View Maps