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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 10
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 126.8 cM
Features by Type:
92 Marker
92 Total

Map Features

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Items 1 to 25 of 92.       of 4 | Next
Cotton - TH - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3834 Marker 62.1 Cotton - HDC - 10 BNL3834 Marker 83.9 (cM) Automated name-based View Maps
Cotton - TH - 14 BNL3834 Marker 60.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3834 Marker 63.6 (cM) Automated name-based View Maps
BNL1989 Marker 62.2 Cotton - HDC - 10 BNL1989 Marker 83.4 (cM) Automated name-based View Maps
JESPR006 Marker 62.3 Cotton - HDC - 14 JESPR006 Marker 58.2 (cM) Automated name-based View Maps
Cotton - TH - 22 JESPR006 Marker 75.7 (cM) Automated name-based View Maps
Cotton - T3 - 14 JESPR006 Marker 61.89 (cM) Automated name-based View Maps
Cotton - HDC - 20 JESPR006 Marker 94 (cM) Automated name-based View Maps
Cotton - T3 - 22 JESPR006 Marker 70.05 (cM) Automated name-based View Maps
Cotton - TH - 20 JESPR006 Marker 56.7 (cM) Automated name-based View Maps
Cotton - HDC - 22 JESPR006 Marker 64.8 (cM) Automated name-based View Maps
Cotton - HDC - 10 JESPR006 Marker 83 (cM) Automated name-based View Maps
Cotton - T3 - 10 JESPR006 Marker 63.34 (cM) Automated name-based View Maps
Cotton - T3 - 20 JESPR006 Marker 56.84 (cM) Automated name-based View Maps
NAU0921 Marker 62.5 Cotton - Graimondii_physical - Gr_Chr11 NAU0921 Marker Cotton 17,797,789 - 17,798,463 (bp) Automated name-based View Maps
Cotton - HDC - 10 NAU0921 Marker 81.1 (cM) Automated name-based View Maps
Cotton - CH - 10 NAU0921 Marker 36.4 (cM) Automated name-based View Maps
TMC10-200 Marker 62.9 Cotton - HDC - 10 TMC10-200 Marker 77.2 (cM) Automated name-based View Maps
BNL1161 Marker 63 Cotton - T3 - 23 BNL1161 Marker 125.68 (cM) Automated name-based View Maps
Cotton - T3 - 10 BNL1161 Marker 57.55 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c10 BNL1161 Marker 75.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 BNL1161b Marker 26.55 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 BNL1161 Marker 97.4 (cM) Automated name-based View Maps
Cotton - E3 - 10 BNL1161 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL1161 Marker 24.6 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL1161 Marker 21.3 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU10 Marker 76.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU10 Marker 49.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL1161a Marker 11.85 (cM) Automated name-based View Maps
Cotton - PK - c10 BNL1161 Marker 111.2 (cM) Automated name-based View Maps
Cotton - GVc - 10 BNL1161 Marker 86.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL1161 Marker 76.5 (cM) Automated name-based View Maps
BNL1569 Marker 63.4 Cotton - HDC - 10 BNL1569 Marker 76 (cM) Automated name-based View Maps
NAU2323 Marker 63.6 Cotton - HDC - 10 CLU2619 Marker 75.8 (cM) Automated name-based View Maps
NAU6132 Marker 64 Cotton - HDC - 2 NAU6132 Marker 60.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6132 Marker 75.5 (cM) Automated name-based View Maps
Cotton - TH - 2 NAU6132 Marker 50.9 (cM) Automated name-based View Maps
NAU1041 Marker 64.2 Cotton - HDC - 10 NAU1041 Marker 75.4 (cM) Automated name-based View Maps
Cotton - T3 - 10 NAU1041 Marker 56.91 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU1041 Marker Cotton 9,898,057 - 9,898,728 (bp) Automated name-based View Maps
NAU6153 Marker 64.3 Cotton - HDC - 10 NAU6153 Marker 75.1 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU6153 Marker 78 (cM) Automated name-based View Maps
NAU5438 Marker 64.8 Cotton - HDC - 10 NAU5438 Marker 73.9 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU5438 Marker 80.6 (cM) Automated name-based View Maps
NAU5316 Marker 64.9 Cotton - HDC - 10 CLU4858 Marker 73.7 (cM) Automated name-based View Maps
NAU6515 Marker 65.3 Cotton - HDC - 20 NAU6515 Marker 79.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU6515 Marker 72.7 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU6515 Marker 68.4 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6515 Marker 64.5 (cM) Automated name-based View Maps
NAU6667 Marker 65.5 Cotton - HDC - 10 NAU6667 Marker 72.3 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU6667 Marker 78.8 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU6667 Marker 65.8 (cM) Automated name-based View Maps
Cotton - E3 - 20 NAU6667 Marker 79.5 (cM) Automated name-based View Maps
CIR166 Marker 65.8 Cotton - Guazuncho2xVH8-BC1 - c20 CIR166 Marker 180.5 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR166 Marker 44.4 (cM) Automated name-based View Maps
Cotton - CH - 10 CIR166 Marker 75.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 CIR166 Marker Cotton 48,926,966 - 48,927,332 (bp) Automated name-based View Maps
Cotton - HDC - 20 CIR166 Marker 72.6 (cM) Automated name-based View Maps
Cotton - CH - 20 CIR166 Marker 41.6 (cM) Automated name-based View Maps
Cotton - GVc - 20 CIR166 Marker 105.6 (cM) Automated name-based View Maps
Cotton - E3 - 10 CIR166 Marker 43.6 (cM) Automated name-based View Maps
NAU3665 Marker 66.3 Cotton - E3 - 20 NAU3665 Marker 79.1 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3665 Marker 70.4 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU3665 Marker 79.3 (cM) Automated name-based View Maps
Cotton - TH - 20 NAU3665 Marker 65 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU3665 Marker 70.9 (cM) Automated name-based View Maps
Y2423 Marker 66.8 Cotton - HDC - 10 Y2423 Marker 69.2 (cM) Automated name-based View Maps
TMA18-180 Marker 67.2 Cotton - HDC - 10 TMA18-180 Marker 68.2 (cM) Automated name-based View Maps
me1SA9-400 Marker 67.6 Cotton - HDC - 10 me1SA9-400 Marker 67.2 (cM) Automated name-based View Maps
NAU2869 Marker 68.5 Cotton - HDC - 10 NAU2869 Marker 65.1 (cM) Automated name-based View Maps
Cotton - HDC - 20 NAU2869 Marker 78.2 (cM) Automated name-based View Maps
Cotton - E3 - 10 NAU2869 Marker 64.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2869 Marker Cotton 49,752,380 - 49,753,299 (bp) Automated name-based View Maps
Cotton - TH - 20 NAU2869 Marker 66.8 (cM) Automated name-based View Maps
CIR082 Marker 68.8 Cotton - Guazuncho2xVH8-BC1 - c10 CIR082 Marker 120.6 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR082 Marker 104.7 (cM) Automated name-based View Maps
Cotton - HDC - 10 CIR082 Marker 64.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c10 CIR082 Marker 36.89 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 CIR082 Marker Cotton 44,921,579 - 44,921,823 (bp) Automated name-based View Maps
NAU3122 Marker 70.2 Cotton - E3 - 20 NAU3122 Marker 79.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU3122 Marker Cotton 51,123,002 - 51,123,762 (bp) Automated name-based View Maps
Cotton - HDC - 20 NAU3122 Marker 75.9 (cM) Automated name-based View Maps
Cotton - HDC - 10 NAU3122 Marker 62.5 (cM) Automated name-based View Maps
NAU2989 Marker 70.5 Cotton - HDC - 10 NAU2989 Marker 62.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr11 NAU2989 Marker Cotton 51,824,732 - 51,825,561 (bp) Automated name-based View Maps
OD3GA38-220 Marker 70.9 Cotton - HDC - 10 OD3GA38-220 Marker 61.6 (cM) Automated name-based View Maps