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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 12
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 12
Map Start: 0 cM
Map Stop: 149.5 cM
Features by Type:
83 Marker
83 Total

Map Features

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Items 1 to 25 of 83.       of 4 | Next
Cotton - TH - 12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Y1315-420 Marker 64.2 Cotton - HDC - 12 Y1315-420 Marker 46.1 (cM) Automated name-based View Maps
DC1SA14-270 Marker 64.8 Cotton - HDC - 12 DC1SA14-270 Marker 46.3 (cM) Automated name-based View Maps
NAU6542 Marker 65.9 Cotton - HDC - 17 NAU6542 Marker 77.7 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU6542 Marker 78.2 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU6542 Marker 55.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU6542 Marker 46.8 (cM) Automated name-based View Maps
GW60-260 Marker 66.3 Cotton - HDC - 12 GW60-260 Marker 47 (cM) Automated name-based View Maps
GW61-275 Marker 66.8 Cotton - HDC - 12 GW61-275 Marker 47.2 (cM) Automated name-based View Maps
NAU2096 Marker 68.6 Cotton - HDC - 12 CLU3809 Marker 48 (cM) Automated name-based View Maps
Cotton - E3 - 12 NAU2096 Marker 86.2 (cM) Automated name-based View Maps
NAU1278 Marker 69.1 Cotton - GVc - 12 NAU1278 Marker 92.7 (cM) Automated name-based View Maps
Cotton - CH - 12 NAU1278 Marker 144.5 (cM) Automated name-based View Maps
Cotton - T3 - 12 NAU1278 Marker 66.79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 NAU1278 Marker 46.83 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU1043 Marker 48.2 (cM) Automated name-based View Maps
NAU2176 Marker 69.6 Cotton - E3 - 12 NAU2176 Marker 80.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU3850 Marker 48.5 (cM) Automated name-based View Maps
NAU3921 Marker 73.7 Cotton - HDC - 12 NAU3921 Marker 50.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3921 Marker Cotton 32,908,103 - 32,908,812 (bp) Automated name-based View Maps
NAU2202 Marker 78.1 Cotton - HDC - 12 NAU2202 Marker 52.7 (cM) Automated name-based View Maps
Cotton - E3 - 12 NAU2202 Marker 88.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU2202 Marker Cotton 42,322,491 - 42,323,042 (bp) Automated name-based View Maps
BNL1707 Marker 78.5 Cotton - GVc - 9 BNL1707 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL1707 Marker 56.6 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL1707 Marker 132 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL1707a Marker 39.38 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL1707 Marker 73 (cM) Automated name-based View Maps
Cotton - GVc - 13 BNL1707 Marker 134.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL1707 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL1707 Marker 91 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 BNL1707 Marker 215 (cM) Automated name-based View Maps
Cotton - HDC - 13 BNL1707 Marker 17.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL1707 Marker 24.3 (cM) Automated name-based View Maps
Cotton - HDC - 9 BNL1707 Marker 6.7 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL1707 Marker 137.1 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL1707 Marker 132.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c13 BNL1707b Marker 62.23 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL1707 Marker 79.3 (cM) Automated name-based View Maps
EM1OD32-155 Marker 79.6 Cotton - HDC - 12 EM1OD32-155 Marker 53.5 (cM) Automated name-based View Maps
BNL1673 Marker 83.2 Cotton - Guazuncho2xVH8-RIL - c12 BNL1673 Marker 34.22 (cM) Automated name-based View Maps
Cotton - T3 - 12 BNL1673 Marker 76.17 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL1673 Marker 72.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL1673 Marker 60.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL1673 Marker 64.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL1673 Marker 81 (cM) Automated name-based View Maps
Cotton - PK - c22 BNL1673 Marker 44.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 BNL1673 Marker Cotton 42,588,287 - 42,588,583 (bp) Automated name-based View Maps
Cotton - E3 - 12 BNL1673 Marker 116.4 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL1673 Marker 114.5 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL1673 Marker 48.3 (cM) Automated name-based View Maps
NAU4020 Marker 84.7 Cotton - HDC - 12 CLU191 Marker 56 (cM) Automated name-based View Maps
NAU0943 Marker 85.1 Cotton - HDC - 12 NAU0943 Marker 56.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU0943 Marker Cotton 43,928,827 - 43,929,461 (bp) Automated name-based View Maps
Cotton - CH - 12 NAU0943 Marker 110.8 (cM) Automated name-based View Maps
GhGAD Marker 85.8 Cotton - HDC - 12 GhGAD Marker 57.6 (cM) Automated name-based View Maps
NAU5419 Marker 86.6 Cotton - Graimondii_physical - Gr_Chr08 NAU5419 Marker Cotton 43,692,218 - 43,692,812 (bp) Automated name-based View Maps
Cotton - E3 - 12 NAU5419 Marker 119.1 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU5419 Marker 58.7 (cM) Automated name-based View Maps
Y2401 Marker 91.9 Cotton - HDC - 12 Y2401 Marker 66.1 (cM) Automated name-based View Maps
NAU2715 Marker 94.1 Cotton - Graimondii_physical - Gr_Chr08 NAU2715 Marker Cotton 47,239,667 - 47,240,463 (bp) Automated name-based View Maps
Cotton - HDC - 26 NAU2715 Marker 97.4 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU2715 Marker 69.2 (cM) Automated name-based View Maps
Cotton - E3 - 12 NAU2715 Marker 129.4 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU2715 Marker 76.3 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU2715 Marker 68.5 (cM) Automated name-based View Maps
NAU3294 Marker 95.1 Cotton - E3 - 12 NAU3294 Marker 125.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4312 Marker 92.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU4312 Marker 70.6 (cM) Automated name-based View Maps
BNL1679 Marker 95.9 Cotton - T3 - 12 BNL1679 Marker 85.33 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL1679 Marker 24.41 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c12 BNL1679 Marker 46.6 (cM) Automated name-based View Maps
Cotton - GVc - 12 BNL1679 Marker 55.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL1679 Marker 57.7 (cM) Automated name-based View Maps
Cotton - CH - 12 BNL1679 Marker 92.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL1679 Marker 71.8 (cM) Automated name-based View Maps
NAU3662 Marker 98.1 Cotton - HDC - 12 CLU4443 Marker 73.3 (cM) Automated name-based View Maps
NAU1151 Marker 99.5 Cotton - HDC - 5 NAU1151 Marker 23.2 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU1151 Marker 74.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 NAU1151 Marker 300.4 (cM) Automated name-based View Maps
Cotton - TH - 4 NAU1151 Marker 126.1 (cM) Automated name-based View Maps
Cotton - GVc - 5 NAU1151 Marker 117 (cM) Automated name-based View Maps
Cotton - HDC - 4 NAU1151 Marker 95.7 (cM) Automated name-based View Maps
Cotton - TH - 6 NAU1151 Marker 90.5 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU1151 Marker 110.9 (cM) Automated name-based View Maps
NAU2170 Marker 101.5 Cotton - HDC - 26 CLU3847 Marker 101.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU3847 Marker 75.6 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU2170 Marker 79.1 (cM) Automated name-based View Maps
NAU5492 Marker 104 Cotton - HDC - 12 CLU830 Marker 77.3 (cM) Automated name-based View Maps