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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 15
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 15
Map Start: 0 cM
Map Stop: 123.4 cM
Features by Type:
81 Marker
81 Total

Map Features

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Items 1 to 25 of 81.       of 4 | Next
Cotton - TH - 15
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL3902 Marker 62.5 Cotton - E3 - 15 BNL3902 Marker 72.7 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL3902 Marker 64.01 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL3902 Marker 80.7 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL3902 Marker 92.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3902 Marker 91 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 BNL3902 Marker Cotton 27,696,732 - 27,697,213 (bp) Automated name-based View Maps
NAU2985 Marker 62.7 Cotton - E3 - 15 NAU2985 Marker 70.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU3973 Marker 80.4 (cM) Automated name-based View Maps
Y2721-3000 Marker 62.9 Cotton - HDC - 15 Y2721-3000 Marker 80.1 (cM) Automated name-based View Maps
NAU3067 Marker 63.2 Cotton - HDC - 15 CLU4227 Marker 79.6 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3067 Marker 70.8 (cM) Automated name-based View Maps
NAU3882 Marker 63.7 Cotton - HDC - 15 NAU3882 Marker 78.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU3882 Marker Cotton 6,580,892 - 6,581,497 (bp) Automated name-based View Maps
TMH08-245 Marker 64.6 Cotton - HDC - 15 TMH08-245 Marker 77.4 (cM) Automated name-based View Maps
NAU3680 Marker 64.8 Cotton - E3 - 15 NAU3680 Marker 65.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU1495 Marker 77.1 (cM) Automated name-based View Maps
NAU3178 Marker 64.9 Cotton - Graimondii_physical - Gr_Chr02 NAU3178 Marker Cotton 44,950,699 - 44,951,435 (bp) Automated name-based View Maps
Cotton - HDC - 15 NAU3178 Marker 76.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3178 Marker 66.9 (cM) Automated name-based View Maps
MUCS322 Marker 64.9 Cotton - HDC - 15 MUCS322 Marker 76.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 MUCS322 Marker Cotton 46,380,226 - 46,380,822 (bp) Automated name-based View Maps
JESPR205 Marker 65.1 Cotton - Guazuncho2xVH8-RIL - c15 JESPR205 Marker 34.88 (cM) Automated name-based View Maps
Cotton - E3 - 15 JESPR205 Marker 57.1 (cM) Automated name-based View Maps
Cotton - T3 - 15 JESPR205 Marker 68.11 (cM) Automated name-based View Maps
Cotton - HDC - 15 JESPR205 Marker 76.6 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR205 Marker 60.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR205 Marker 60.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 JESPR205 Marker Cotton 48,327,113 - 48,327,693 (bp) Automated name-based View Maps
JESPR180 Marker 65.1 Cotton - HDC - 15 JESPR180 Marker 76.6 (cM) Automated name-based View Maps
Cotton - T3 - 15 JESPR180 Marker 68.22 (cM) Automated name-based View Maps
Cotton - E3 - 15 JESPR180 Marker 63.9 (cM) Automated name-based View Maps
Cotton - CH - 15 JESPR180 Marker 87.6 (cM) Automated name-based View Maps
JESPR298 Marker 65.2 Cotton - HDC - 15 JESPR298 Marker 76.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 JESPR298 Marker 57.7 (cM) Automated name-based View Maps
Cotton - T3 - 15 JESPR298 Marker 87.89 (cM) Automated name-based View Maps
Cotton - E3 - 15 JESPR298 Marker 64.4 (cM) Automated name-based View Maps
Cotton - CH - 15 JESPR298 Marker 88 (cM) Automated name-based View Maps
NAU1521 Marker 65.4 Cotton - HDC - 15 NAU1521 Marker 76.3 (cM) Automated name-based View Maps
BNL0162 Marker 65.9 Cotton - CH - 15 BNL0162 Marker 70.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 BNL0162 Marker 75.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL0162 Marker 63.6 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL0162 Marker 69.14 (cM) Automated name-based View Maps
BNL3101 Marker 66.2 Cotton - HDC - 15 BNL3101 Marker 75 (cM) Automated name-based View Maps
NAU3690 Marker 66.8 Cotton - E3 - 15 NAU3690 Marker 63.4 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU3690 Marker 76.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU3690 Marker Cotton 51,671,372 - 51,672,107 (bp) Automated name-based View Maps
Cotton - HDC - 15 NAU3690 Marker 80.6 (cM) Automated name-based View Maps
Cotton - GVc - 15 NAU3690 Marker 60.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 NAU3690 Marker 35.55 (cM) Automated name-based View Maps
Cotton - HDC - 1 NAU3690 Marker 54 (cM) Automated name-based View Maps
NAU3188 Marker 66.8 Cotton - HDC - 15 NAU3188 Marker 73.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU3188 Marker Cotton 47,380,140 - 47,380,804 (bp) Automated name-based View Maps
Cotton - E3 - 15 NAU3188 Marker 78.9 (cM) Automated name-based View Maps
NAU3496 Marker 66.9 Cotton - HDC - 15 NAU3496 Marker 73.3 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3496 Marker 62.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU3496 Marker Cotton 53,228,348 - 53,229,093 (bp) Automated name-based View Maps
NAU3433 Marker 67.9 Cotton - HDC - 15 NAU3433 Marker 70.9 (cM) Automated name-based View Maps
Cotton - HDC - 1 NAU3433 Marker 50 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3433 Marker 60.5 (cM) Automated name-based View Maps
Cotton - TH - 1 NAU3433 Marker 79.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU3433 Marker Cotton 55,462,914 - 55,463,587 (bp) Automated name-based View Maps
BNL2920 Marker 68.2 Cotton - CH - 15 BNL2920 Marker 67.5 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL2920 Marker 54.9 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU29 Marker 70.2 (cM) Automated name-based View Maps
NAU3736 Marker 68.2 Cotton - E3 - 1 NAU3736 Marker 73.2 (cM) Automated name-based View Maps
Cotton - E3 - 15 NAU3736 Marker 59.9 (cM) Automated name-based View Maps
Cotton - HDC - 15 NAU3736 Marker 70.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr02 NAU3736 Marker Cotton 55,835,234 - 55,836,030 (bp) Automated name-based View Maps
NAU6584 Marker 69 Cotton - TH - 3 NAU6584 Marker 8.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 NAU6584 Marker 70.1 (cM) Automated name-based View Maps
TMF12-195 Marker 69.5 Cotton - HDC - 15 TMF12-195 Marker 70.1 (cM) Automated name-based View Maps
TMG11-225 Marker 69.8 Cotton - HDC - 15 TMG11-225 Marker 70.1 (cM) Automated name-based View Maps
NAU4081 Marker 70.2 Cotton - HDC - 26 CLU4602 Marker 13.2 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU4602 Marker 70 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU4081 Marker 11.5 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4602 Marker 89.5 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU4081 Marker 60.6 (cM) Automated name-based View Maps