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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 16
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 16
Map Start: 0 cM
Map Stop: 130.1 cM
Features by Type:
82 Marker
82 Total

Map Features

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Items 1 to 25 of 82.       of 4 | Next
Cotton - TH - 16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
JESPR102 Marker 63.8 Cotton - Guazuncho2xVH8-BC1 - c15 JESPR102 Marker 101.2 (cM) Automated name-based View Maps
Cotton - CH - 16 JESPR102 Marker 75.7 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR102 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 75.7 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU303 Marker 80.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR102 Marker 127.5 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR102 Marker 67.3 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR102 Marker 78 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 61.4 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR102 Marker 47.06 (cM) Automated name-based View Maps
CIR100 Marker 64.3 Cotton - T3 - 16 CIR100 Marker 51.97 (cM) Automated name-based View Maps
Cotton - HDC - 16 CIR100 Marker 77.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 CIR100 Marker 80.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 CIR100 Marker 35.77 (cM) Automated name-based View Maps
Cotton - CH - 16 CIR100 Marker 68.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 CIR100 Marker 147.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 CIR100 Marker Cotton 12,757,196 - 12,757,404 (bp) Automated name-based View Maps
BNL2986 Marker 67.8 Cotton - Guazuncho2xVH8-BC2 - c16 BNL2986 Marker 46.1 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL2986 Marker 54.1 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL2986 Marker 57.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL2986 Marker Cotton 15,952,145 - 15,952,543 (bp) Automated name-based View Maps
Cotton - HDC - 16 BNL2986 Marker 70.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 BNL2986 Marker 119.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 BNL2986 Marker 30.82 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL2986 Marker 71.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL2986 Marker 58.37 (cM) Automated name-based View Maps
NAU2626 Marker 69.7 Cotton - HDC - 16 NAU2626 Marker 69 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU2626 Marker Cotton 19,911,554 - 19,912,277 (bp) Automated name-based View Maps
BNL3799 Marker 70.7 Cotton - HDC - 16 BNL3799 Marker 68.2 (cM) Automated name-based View Maps
NAU2432 Marker 71.1 Cotton - HDC - 7 CLU3976 Marker 84.1 (cM) Automated name-based View Maps
Cotton - GVc - 16 NAU2432 Marker 70.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU3976 Marker 68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 NAU2432b Marker 29.95 (cM) Automated name-based View Maps
Cotton - E3 - 7 NAU2432 Marker 47.3 (cM) Automated name-based View Maps
Cotton - TH - 7 NAU2432 Marker 90.6 (cM) Automated name-based View Maps
Cotton - GVc - 7 NAU2432 Marker 55.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 NAU2432a Marker 28.93 (cM) Automated name-based View Maps
JESPR128 Marker 71.7 Cotton - GVc - 16 JESPR128 Marker 64.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 JESPR128 Marker 112.7 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR128 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR128 Marker Cotton 17,714,732 - 17,715,061 (bp) Automated name-based View Maps
Cotton - HDC - 16 JESPR128 Marker 61.5 (cM) Automated name-based View Maps
Cotton - CH - 16 JESPR128 Marker 42.5 (cM) Automated name-based View Maps
MYB4 Marker 72.3 Cotton - HDC - 16 MYB4 Marker 60.1 (cM) Automated name-based View Maps
NAU3196 Marker 72.4 Cotton - Graimondii_physical - Gr_Chr01 NAU3196 Marker Cotton 19,896,703 - 19,897,384 (bp) Automated name-based View Maps
Cotton - HDC - 16 NAU3196 Marker 59.8 (cM) Automated name-based View Maps
NAU5061 Marker 73.3 Cotton - HDC - 16 NAU5061 Marker 57.7 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU5061 Marker 95.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU5061 Marker Cotton 20,430,111 - 20,431,041 (bp) Automated name-based View Maps
NAU6634 Marker 74.6 Cotton - HDC - 17 NAU6634 Marker 69.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU6634 Marker 54.6 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU6634 Marker 62.6 (cM) Automated name-based View Maps
BNL1694 Marker 75.5 Cotton - T3 - 7 BNL1694 Marker 85.88 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL1694 Marker 58.1 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1694 Marker 52.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 BNL1694 Marker 86.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1694 Marker 78.22 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 16 (cM) Automated name-based View Maps
Cotton - GVc - 7 BNL1694 Marker 36.4 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1694 Marker 94.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 64.5 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1694 Marker 69.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1694 Marker 67.8 (cM) Automated name-based View Maps
NAU5024 Marker 76.4 Cotton - HDC - 16 CLU4705 Marker 51.2 (cM) Automated name-based View Maps
BNL2441 Marker 76.9 Cotton - E3 - 16 BNL2441 Marker 106.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL2441 Marker 65.3 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL2441 Marker 18.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL2441 Marker 50.5 (cM) Automated name-based View Maps
NAU6430 Marker 77 Cotton - HDC - 16 NAU6430 Marker 50.3 (cM) Automated name-based View Maps
NAU4943 Marker 77.4 Cotton - HDC - 16 NAU4943 Marker 49.8 (cM) Automated name-based View Maps
NAU4017 Marker 77.5 Cotton - Graimondii_physical - Gr_Chr11 NAU4017 Marker Cotton 39,446,645 - 39,447,461 (bp) Automated name-based View Maps
Cotton - HDC - 16 NAU4017 Marker 49.6 (cM) Automated name-based View Maps
STV007 Marker 77.7 Cotton - Graimondii_physical - Gr_Chr01 STV007 Marker Cotton 25,727,635 - 25,728,186 (bp) Automated name-based View Maps
Cotton - HDC - 16 STV007 Marker 49.4 (cM) Automated name-based View Maps
NAU6310 Marker 78.1 Cotton - TH - 24 NAU6310 Marker 88.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU6310 Marker 96 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU6310 Marker 48.8 (cM) Automated name-based View Maps
NAU6326 Marker 78.3 Cotton - HDC - 16 NAU6326 Marker 48.5 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU6326 Marker 108.6 (cM) Automated name-based View Maps
GW36-590 Marker 79.2 Cotton - HDC - 16 GW36-590 Marker 47.3 (cM) Automated name-based View Maps
BNL1026 Marker 79.4 Cotton - E3 - 7 BNL1026 Marker 82.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1026 Marker 82.92 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1026 Marker 86.92 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1026 Marker 66.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1026 Marker 66.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1026 Marker 47 (cM) Automated name-based View Maps
NAU6375 Marker 79.9 Cotton - HDC - 16 NAU6375 Marker 46.6 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU6375 Marker 115.2 (cM) Automated name-based View Maps
NAU6664 Marker 80 Cotton - E3 - 16 NAU6664 Marker 114.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU6664 Marker 46.5 (cM) Automated name-based View Maps
TMB09-170 Marker 80.7 Cotton - HDC - 16 TMB09-170 Marker 46 (cM) Automated name-based View Maps