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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 17
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Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
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Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 17
Map Start: 0 cM
Map Stop: 126.6 cM
Features by Type:
67 Marker
67 Total

Map Features

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Items 1 to 25 of 67.       of 3 | Next
Cotton - TH - 17
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU2662 Marker 59.1 Cotton - Graimondii_physical - Gr_Chr03 NAU2662 Marker Cotton 22,460,511 - 22,461,268 (bp) Automated name-based View Maps
Cotton - HDC - 17 NAU2662 Marker 73.9 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU2662 Marker 80.4 (cM) Automated name-based View Maps
Y1313-250 Marker 60.1 Cotton - HDC - 17 Y1313-250 Marker 72.7 (cM) Automated name-based View Maps
BNL2182 Marker 61 Cotton - E3 - 17 BNL2182 Marker 83.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL2182 Marker 71.6 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL2182 Marker 79.2 (cM) Automated name-based View Maps
OD3SA7-500 Marker 61.6 Cotton - HDC - 17 OD3SA7-500 Marker 70.9 (cM) Automated name-based View Maps
NAU6634 Marker 62.6 Cotton - HDC - 16 NAU6634 Marker 54.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU6634 Marker 69.8 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU6634 Marker 74.6 (cM) Automated name-based View Maps
E7M11-200 Marker 63.5 Cotton - HDC - 17 E7M11-200 Marker 68.7 (cM) Automated name-based View Maps
NAU2325 Marker 64.5 Cotton - Graimondii_physical - Gr_Chr03 NAU2325 Marker Cotton 6,464,194 - 6,464,745 (bp) Automated name-based View Maps
Cotton - HDC - 17 NAU2325 Marker 67.6 (cM) Automated name-based View Maps
NAU2908 Marker 68.8 Cotton - E3 - 17 NAU2908 Marker 92.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU2908 Marker 52.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU2908 Marker 62.5 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU2908 Marker 86.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU2908 Marker Cotton 4,199,085 - 4,199,840 (bp) Automated name-based View Maps
NAU3349 Marker 69.9 Cotton - HDC - 17 NAU3349 Marker 61.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU3349 Marker 94 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU3349 Marker Cotton 4,162,805 - 4,163,359 (bp) Automated name-based View Maps
NAU2761 Marker 70.6 Cotton - E3 - 2 NAU2761 Marker 95.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU2761 Marker 60.4 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU2761 Marker 73.9 (cM) Automated name-based View Maps
NAU1028 Marker 70.9 Cotton - HDC - 11 CLU1742 Marker 131.8 (cM) Automated name-based View Maps
Cotton - GVc - 17 NAU1028 Marker 37.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c11 NAU1028b Marker 44.31 (cM) Automated name-based View Maps
Cotton - GVc - 11 NAU1028 Marker 89.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 NAU1028a Marker 39.6 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU1742 Marker 60.1 (cM) Automated name-based View Maps
NAU4035 Marker 72.5 Cotton - HDC - 2 CLU579 Marker 50 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU579 Marker 58.8 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU4035 Marker 92.5 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU4035 Marker 88.4 (cM) Automated name-based View Maps
NAU6129 Marker 77.9 Cotton - HDC - 17 NAU6129 Marker 54.3 (cM) Automated name-based View Maps
BNL3590 Marker 79.7 Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
TMK08-260 Marker 84.8 Cotton - HDC - 17 TMK08-260 Marker 48.7 (cM) Automated name-based View Maps
NAU3257 Marker 86.5 Cotton - HDC - 17 CLU2853 Marker 47.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 NAU3257 Marker 35.79 (cM) Automated name-based View Maps
Cotton - GVc - 15 NAU3257 Marker 60.6 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU2853 Marker 80 (cM) Automated name-based View Maps
Y1285 Marker 89.5 Cotton - HDC - 17 Y1285 Marker 44.8 (cM) Automated name-based View Maps
JESPR304 Marker 99.8 Cotton - E3 - 2 JESPR304 Marker 108.6 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR304 Marker 26.3 (cM) Automated name-based View Maps
Cotton - CH - 2 JESPR304 Marker 15.8 (cM) Automated name-based View Maps
Cotton - TH - 2 JESPR304 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 JESPR304 Marker Cotton 4,456,642 - 4,457,058 (bp) Automated name-based View Maps
Cotton - T3 - 2 JESPR304 Marker 21.25 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR304 Marker 36.3 (cM) Automated name-based View Maps
Y1325-225 Marker 101.1 Cotton - HDC - 17 Y1325-225 Marker 35.3 (cM) Automated name-based View Maps
NAU3292 Marker 105.7 Cotton - HDC - 17 NAU3292 Marker 31.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU3292 Marker Cotton 1,129,775 - 1,130,627 (bp) Automated name-based View Maps
BNL0834 Marker 111.5 Cotton - Guazuncho2xVH8-BC1 - c17 BNL834 Marker 91.4 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL0834 Marker 148 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL0834 Marker 127.4 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL0834 Marker 70.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL834 Marker 136.2 (cM) Automated name-based View Maps
Cotton - T3 - 14 BNL0834 Marker 6.75 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL0834 Marker 6.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL0834 Marker 26.7 (cM) Automated name-based View Maps
NAU2859 Marker 114.3 Cotton - HDC - 17 CLU4151 Marker 20.8 (cM) Automated name-based View Maps
Cotton - GVc - 17 NAU2859 Marker 76.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 NAU2859 Marker 41.75 (cM) Automated name-based View Maps
MUCS537 Marker 118.3 Cotton - HDC - 17 CLU554 Marker 16.7 (cM) Automated name-based View Maps
NAU5111 Marker 119.5 Cotton - HDC - 2 CLU4165 Marker 2 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU4165 Marker 15.1 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU5111 Marker 141 (cM) Automated name-based View Maps
NAU2898 Marker 119.8 Cotton - E3 - 17 NAU2898 Marker 142.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 NAU2898a Marker 45.79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 NAU2898b Marker 81.21 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU2898 Marker 105.9 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU4165 Marker 15.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU4165 Marker 2 (cM) Automated name-based View Maps
Cotton - GVc - 17 NAU2898 Marker 82.2 (cM) Automated name-based View Maps