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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-TH
(Reference Set)
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Correspondences
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Maps 23
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 23
Map Start: 0 cM
Map Stop: 154.7 cM
Features by Type:
74 Marker
74 Total

Map Features

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Items 1 to 25 of 74.       of 3 | Next
Cotton - TH - 23
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU2964 Marker 53 Cotton - HDC - 23 CLU1578 Marker 70 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU2964 Marker 54.5 (cM) Automated name-based View Maps
NAU6138 Marker 53 Cotton - E3 - 23 NAU6138 Marker 54.8 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU6138 Marker 70 (cM) Automated name-based View Maps
NAU6564 Marker 53 Cotton - HDC - 23 NAU6564 Marker 70 (cM) Automated name-based View Maps
TMN07-200 Marker 53.9 Cotton - HDC - 23 TMN07-200 Marker 70.2 (cM) Automated name-based View Maps
JESPR151 Marker 55.9 Cotton - Guazuncho2xVH8-RIL - c23 JESPR151 Marker 27 (cM) Automated name-based View Maps
Cotton - E3 - 23 JESPR151 Marker 55.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 JESPR151 Marker 104.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR151 Marker 70.6 (cM) Automated name-based View Maps
Cotton - GVc - 23 JESPR151 Marker 45.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 JESPR151 Marker Cotton 20,356,599 - 20,356,892 (bp) Automated name-based View Maps
JESPR167 Marker 56.1 Cotton - Graimondii_physical - Gr_Chr06 JESPR167 Marker Cotton 514,093 - 514,450 (bp) Automated name-based View Maps
Cotton - TH - 20 JESPR167 Marker 55.5 (cM) Automated name-based View Maps
Cotton - TH - 18 JESPR167 Marker 67.9 (cM) Automated name-based View Maps
Cotton - HDC - 20 JESPR167 Marker 96.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 JESPR167 Marker 70.7 (cM) Automated name-based View Maps
Cotton - HDC - 18 JESPR167 Marker 54.6 (cM) Automated name-based View Maps
NAU3194 Marker 56.4 Cotton - TH - 9 NAU3194 Marker 42.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 NAU3194 Marker 43.2 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU3194 Marker 70.8 (cM) Automated name-based View Maps
Cotton - E3 - 9 NAU3194 Marker 49.5 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU3194 Marker 54.9 (cM) Automated name-based View Maps
NAU6676 Marker 57.6 Cotton - HDC - 23 NAU6676 Marker 71.2 (cM) Automated name-based View Maps
NAU6581 Marker 58.6 Cotton - HDC - 23 NAU6581 Marker 71.6 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU6581 Marker 59 (cM) Automated name-based View Maps
NAU2200 Marker 59.2 Cotton - T3 - 9 NAU2200 Marker 106.09 (cM) Automated name-based View Maps
Cotton - T3 - 23 NAU2200 Marker 102.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU3861 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU3861 Marker 49.7 (cM) Automated name-based View Maps
NAU4079 Marker 59.7 Cotton - HDC - 23 CLU4601 Marker 72.2 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU4079 Marker 61.5 (cM) Automated name-based View Maps
NAU3986 Marker 60.1 Cotton - Graimondii_physical - Gr_Chr06 NAU3986 Marker Cotton 31,635,577 - 31,636,150 (bp) Automated name-based View Maps
Cotton - HDC - 23 NAU3986 Marker 72.6 (cM) Automated name-based View Maps
NAU2753 Marker 60.6 Cotton - HDC - 23 NAU2753 Marker 73 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU2753 Marker 58.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU2753 Marker Cotton 32,441,536 - 32,442,390 (bp) Automated name-based View Maps
Y1328-700 Marker 62.4 Cotton - HDC - 23 Y1328-700 Marker 74.7 (cM) Automated name-based View Maps
em6PM8-225 Marker 63.6 Cotton - HDC - 23 em6PM8-225 Marker 75.7 (cM) Automated name-based View Maps
E12M8-350 Marker 64.2 Cotton - HDC - 23 E12M8-350 Marker 76.3 (cM) Automated name-based View Maps
NAU5350 Marker 66.6 Cotton - HDC - 23 NAU5350 Marker 78.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 NAU5350 Marker Cotton 33,592,731 - 33,593,258 (bp) Automated name-based View Maps
BNL3511 Marker 68.4 Cotton - CH - 23 BNL3511 Marker 105.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr06 BNL3511 Marker Cotton 33,818,734 - 33,819,095 (bp) Automated name-based View Maps
Cotton - GVc - 23 BNL3511 Marker 54.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL3511 Marker 115 (cM) Automated name-based View Maps
Cotton - HDC - 23 BNL3511 Marker 80.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL3511 Marker 36.65 (cM) Automated name-based View Maps
Cotton - E3 - 23 BNL3511 Marker 62.3 (cM) Automated name-based View Maps
BNL3031 Marker 69.6 Cotton - PK - c9 BNL3031 Marker 42.5 (cM) Automated name-based View Maps
Cotton - PK - c9 BNL3031 Marker 46.1 (cM) Automated name-based View Maps
Cotton - CH - 9 BNL3031 Marker 128.8 (cM) Automated name-based View Maps
Cotton - T3 - 9 BNL3031 Marker 90.52 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c9 BNL3031 Marker 78.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 BNL3031b Marker 36.98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c23 BNL3031 Marker 58.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c23 BNL3031 Marker 117.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 BNL3031 Marker 118 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU15 Marker 82.2 (cM) Automated name-based View Maps
Cotton - PK - c23 BNL3031 Marker 88.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c23 BNL3031a Marker 38.53 (cM) Automated name-based View Maps
Cotton - CH - 23 BNL3031 Marker 111.7 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 49.6 (cM) Automated name-based View Maps
Cotton - TH - 9 BNL3031 Marker 58.6 (cM) Automated name-based View Maps
Cotton - HDC - 9 CLU15 Marker 60.4 (cM) Automated name-based View Maps
Cotton - GVc - 9 BNL3031 Marker 50.5 (cM) Automated name-based View Maps
Cotton - T3 - 23 BNL3031 Marker 92.69 (cM) Automated name-based View Maps
Cotton - E3 - 9 BNL3031 Marker 70.5 (cM) Automated name-based View Maps
Cotton - GVc - 23 BNL3031 Marker 57.3 (cM) Automated name-based View Maps
NAU3763 Marker 71.8 Cotton - Graimondii_physical - Gr_Chr06 NAU3763 Marker Cotton 34,498,610 - 34,499,292 (bp) Automated name-based View Maps
Cotton - HDC - 23 NAU3763 Marker 84 (cM) Automated name-based View Maps
Cotton - E3 - 23 NAU3763 Marker 66.3 (cM) Automated name-based View Maps
NAU5508 Marker 74.3 Cotton - E3 - 23 NAU5508 Marker 26.1 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU1724 Marker 86.1 (cM) Automated name-based View Maps
Cotton - HDC - 23 CLU1724 Marker 39.6 (cM) Automated name-based View Maps
NAU2567 Marker 75.1 Cotton - Graimondii_physical - Gr_Chr06 NAU2567 Marker Cotton 35,134,477 - 35,134,735 (bp) Automated name-based View Maps
Cotton - E3 - 23 NAU2567 Marker 67.6 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU2567 Marker 86.8 (cM) Automated name-based View Maps
NAU5472 Marker 75.5 Cotton - HDC - 23 CLU2646 Marker 87.1 (cM) Automated name-based View Maps
NAU2739 Marker 80.7 Cotton - E3 - 23 NAU2739 Marker 55.3 (cM) Automated name-based View Maps
Cotton - HDC - 23 NAU2739 Marker 91.5 (cM) Automated name-based View Maps
Cotton - E3 - 9 NAU2739 Marker 48.5 (cM) Automated name-based View Maps
DC1SA21-300 Marker 83.3 Cotton - HDC - 23 DC1SA21-300 Marker 93.7 (cM) Automated name-based View Maps