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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 24
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 24
Map Start: 0 cM
Map Stop: 166 cM
Features by Type:
105 Marker
105 Total

Map Features

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Items 1 to 25 of 105.       of 5 | Next
Cotton - TH - 24
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TMD05-225 Marker 82.9 Cotton - HDC - 24 TMD05-225 Marker 82.2 (cM) Automated name-based View Maps
NAU3071 Marker 83.2 Cotton - HDC - 24 CLU1476 Marker 83 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3071 Marker 46 (cM) Automated name-based View Maps
TMP14-240 Marker 84.5 Cotton - HDC - 24 TMP14-240 Marker 86.4 (cM) Automated name-based View Maps
BNL3474 Marker 85 Cotton - HDC - 8 BNL3474 Marker 102.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 BNL3474 Marker 170.6 (cM) Automated name-based View Maps
Cotton - TH - 8 BNL3474 Marker 81.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 87.8 (cM) Automated name-based View Maps
Cotton - T3 - 8 BNL3474 Marker 57.66 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3474 Marker Cotton 38,654,033 - 38,654,647 (bp) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3474 Marker 110.6 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3474 Marker 118.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3474 Marker 104.4 (cM) Automated name-based View Maps
Cotton - GVc - 24 BNL3474 Marker 75.9 (cM) Automated name-based View Maps
Cotton - GVc - 8 BNL3474 Marker 118.3 (cM) Automated name-based View Maps
em5DC1-110 Marker 85.8 Cotton - HDC - 24 em5DC1-110 Marker 89.9 (cM) Automated name-based View Maps
GW57-160 Marker 86.2 Cotton - HDC - 24 GW57-160 Marker 90.9 (cM) Automated name-based View Maps
GW58-160 Marker 86.4 Cotton - HDC - 24 GW58-160 Marker 91.5 (cM) Automated name-based View Maps
NAU2292 Marker 87 Cotton - HDC - 24 CLU3906 Marker 93 (cM) Automated name-based View Maps
BNL2568 Marker 87.5 Cotton - E3 - 24 BNL2568 Marker 33.5 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL2568 Marker 120 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL2568 Marker 94.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL2568 Marker Cotton 39,399,704 - 39,400,058 (bp) Automated name-based View Maps
NAU6310 Marker 88.1 Cotton - HDC - 16 NAU6310 Marker 48.8 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU6310 Marker 78.1 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU6310 Marker 96 (cM) Automated name-based View Maps
E7M11-150 Marker 88.6 Cotton - HDC - 24 E7M11-150 Marker 97.3 (cM) Automated name-based View Maps
NAU2914 Marker 88.9 Cotton - HDC - 8 CLU1940 Marker 94.7 (cM) Automated name-based View Maps
Cotton - E3 - 8 NAU2914 Marker 38.1 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU2914 Marker 72 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU2914 Marker 32.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 CLU1940 Marker 98.1 (cM) Automated name-based View Maps
NAU1531 Marker 89.1 Cotton - HDC - 24 NAU1531 Marker 98.6 (cM) Automated name-based View Maps
Cotton - TH - 8 NAU1531 Marker 71.8 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU1531 Marker 94.6 (cM) Automated name-based View Maps
NAU2240 Marker 89.5 Cotton - E3 - 24 NAU2240 Marker 31.9 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU2240 Marker 99.7 (cM) Automated name-based View Maps
NAU1262 Marker 89.6 Cotton - HDC - 24 NAU1262 Marker 112.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU1262 Marker Cotton 11,639,260 - 11,639,995 (bp) Automated name-based View Maps
Cotton - CH - 24 NAU1262 Marker 121.4 (cM) Automated name-based View Maps
Cotton - T3 - 24 NAU1262 Marker 16.92 (cM) Automated name-based View Maps
NAU6213 Marker 89.8 Cotton - E3 - 24 NAU6213 Marker 35.3 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU6213 Marker 100.5 (cM) Automated name-based View Maps
NAU3773 Marker 89.9 Cotton - TH - 8 NAU3773 Marker 33.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 NAU3773 Marker 40.1 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3773 Marker 71.6 (cM) Automated name-based View Maps
Cotton - HDC - 24 NAU3773 Marker 100.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3773 Marker Cotton 32,023,683 - 32,024,330 (bp) Automated name-based View Maps
NAU2631 Marker 90 Cotton - E3 - 24 NAU2631 Marker 11 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU2631 Marker Cotton 28,514,320 - 28,515,064 (bp) Automated name-based View Maps
Cotton - HDC - 24 NAU2631 Marker 101 (cM) Automated name-based View Maps
NAU6642 Marker 90 Cotton - HDC - 24 NAU6642 Marker 101 (cM) Automated name-based View Maps
NAU3954 Marker 90.2 Cotton - HDC - 24 NAU3954 Marker 101.5 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3954 Marker 26.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3954 Marker Cotton 32,510,081 - 32,510,801 (bp) Automated name-based View Maps
NAU3988 Marker 90.3 Cotton - HDC - 24 CLU2660 Marker 101.8 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU3988 Marker 31.7 (cM) Automated name-based View Maps
NAU6235 Marker 90.4 Cotton - HDC - 24 NAU6235 Marker 102 (cM) Automated name-based View Maps
NAU2731 Marker 90.4 Cotton - HDC - 24 CLU2934 Marker 102 (cM) Automated name-based View Maps
Cotton - E3 - 24 NAU2731 Marker 31.2 (cM) Automated name-based View Maps
TML21-300 Marker 90.5 Cotton - HDC - 24 TML21-300 Marker 102.3 (cM) Automated name-based View Maps
BNL3084 Marker 90.5 Cotton - GVc - 24 BNL3084 Marker 79.4 (cM) Automated name-based View Maps
Cotton - E3 - 24 BNL3084 Marker 31.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 BNL3084 Marker 114.6 (cM) Automated name-based View Maps
Cotton - CH - 24 BNL3084 Marker 98.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c24 BNL3084 Marker 64.19 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 BNL3084 Marker Cotton 28,531,890 - 28,532,488 (bp) Automated name-based View Maps
Cotton - T3 - 24 BNL3084 Marker 19.8 (cM) Automated name-based View Maps
Cotton - HDC - 24 BNL3084 Marker 110.1 (cM) Automated name-based View Maps