CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 26
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 26
Map Start: 0 cM
Map Stop: 132.8 cM
Features by Type:
97 Marker
97 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 97.       of 4 | Next
Cotton - TH - 26
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU6659 Marker 47 Cotton - TH - 12 NAU6659 Marker 61.5 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU6659 Marker 44.4 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU6659 Marker 26.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU6659 Marker 57.6 (cM) Automated name-based View Maps
NAU0915 Marker 45.6 Cotton - HDC - 26 NAU0915 Marker 55.7 (cM) Automated name-based View Maps
Cotton - GVc - 12 NAU0915 Marker 39.3 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU0915 Marker 84.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr12 NAU0915 Marker Cotton 33,872,535 - 33,873,155 (bp) Automated name-based View Maps
BNL3816 Marker 44.8 Cotton - T3 - 26 BNL3816 Marker 30.62 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU45 Marker 37.3 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU45 Marker 62 (cM) Automated name-based View Maps
Cotton - TH - 12 BNL3816 Marker 51 (cM) Automated name-based View Maps
JESPR092 Marker 42.1 Cotton - T3 - 26 JESPR092 Marker 27.5 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR092 Marker 84.2 (cM) Automated name-based View Maps
Cotton - HDC - 26 JESPR092 Marker 59.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR092 Marker 132.1 (cM) Automated name-based View Maps
Cotton - E3 - 26 JESPR092 Marker 29.4 (cM) Automated name-based View Maps
me2em2-100 Marker 44.3 Cotton - HDC - 26 me2em2-100 Marker 53.9 (cM) Automated name-based View Maps
NAU0877 Marker 41.3 Cotton - T3 - 26 NAU0877 Marker 18.18 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU0877 Marker 49.8 (cM) Automated name-based View Maps
E2M11-200 Marker 39.2 Cotton - HDC - 26 E2M11-200 Marker 46.8 (cM) Automated name-based View Maps
NAU1119 Marker 41.3 Cotton - HDC - 26 NAU1119 Marker 49.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU1119 Marker Cotton 6,338,004 - 6,338,869 (bp) Automated name-based View Maps
Cotton - CH - 26 NAU1119 Marker 140.2 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU1119 Marker 45.7 (cM) Automated name-based View Maps
Cotton - CH - 26 NAU1119 Marker 141.5 (cM) Automated name-based View Maps
me5OD12-270 Marker 36.8 Cotton - HDC - 26 me5OD12-270 Marker 43.4 (cM) Automated name-based View Maps
NAU3084 Marker 132.8 Cotton - E3 - 26 NAU3084 Marker 92.4 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU184 Marker 152.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU184 Marker 115.4 (cM) Automated name-based View Maps
E10M3-190 Marker 35.2 Cotton - HDC - 26 E10M3-190 Marker 41.1 (cM) Automated name-based View Maps
NAU3865 Marker 34.6 Cotton - HDC - 26 NAU3865 Marker 40.2 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU3865 Marker 23.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3865 Marker Cotton 6,577,132 - 6,577,986 (bp) Automated name-based View Maps
NAU4089 Marker 33.2 Cotton - HDC - 12 CLU4607 Marker 54.6 (cM) Automated name-based View Maps
Cotton - GVc - 12 NAU4089 Marker 82.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4607 Marker 38.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 NAU4089 Marker 35.57 (cM) Automated name-based View Maps
NAU3465 Marker 127.6 Cotton - HDC - 26 NAU3465 Marker 146.7 (cM) Automated name-based View Maps
NAU3896 Marker 125 Cotton - GVc - 26 NAU3896 Marker 2.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3896 Marker Cotton 56,989,571 - 56,990,310 (bp) Automated name-based View Maps
Cotton - HDC - 26 NAU3896 Marker 140.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 NAU3896 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 26 NAU3896 Marker 89.1 (cM) Automated name-based View Maps
JESPR300 Marker 123.7 Cotton - T3 - 12 JESPR300 Marker 120.31 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 JESPR300a Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 12 JESPR300 Marker 2.7 (cM) Automated name-based View Maps
Cotton - GVc - 26 JESPR300 Marker 1.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c26 JESPR300b Marker 1.13 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 JESPR300 Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU2020 Marker 112.9 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU2020 Marker 142.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 JESPR300 Marker 5.2 (cM) Automated name-based View Maps
Cotton - T3 - 26 JESPR300 Marker 109.91 (cM) Automated name-based View Maps
Cotton - TH - 12 JESPR300 Marker 149.5 (cM) Automated name-based View Maps
Cotton - E3 - 12 JESPR300 Marker 210 (cM) Automated name-based View Maps
NAU1274 Marker 33 Cotton - HDC - 12 NAU1274 Marker 34.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU1274 Marker Cotton 4,038,691 - 4,039,522 (bp) Automated name-based View Maps
Cotton - GVc - 26 NAU1274 Marker 105.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU1274 Marker 37.9 (cM) Automated name-based View Maps
Cotton - CH - 26 NAU1274 Marker 150.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c26 NAU1274 Marker 155 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU1274 Marker 44.1 (cM) Automated name-based View Maps
NAU4090 Marker 31.8 Cotton - E3 - 26 NAU4090 Marker 14.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 CLU4607 Marker 54.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4607 Marker 38.2 (cM) Automated name-based View Maps
ME8GA5-225 Marker 29.6 Cotton - HDC - 26 ME8GA5-225 Marker 34 (cM) Automated name-based View Maps
NAU3032 Marker 118 Cotton - Graimondii_physical - Gr_Chr08 NAU3032 Marker Cotton 56,012,714 - 56,013,383 (bp) Automated name-based View Maps
Cotton - E3 - 26 NAU3032 Marker 70.5 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3032 Marker 136.8 (cM) Automated name-based View Maps
BNL3994 Marker 111.1 Cotton - Guazuncho2xVH8-BC1 - c4 BNL3994 Marker 104.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 BNL3994 Marker 130.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL3994 Marker 79.2 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL3994 Marker 62.5 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL3994 Marker 53.1 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL3994 Marker 56.39 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 BNL3994 Marker Cotton 62,969,477 - 62,970,033 (bp) Automated name-based View Maps
Cotton - E3 - 4 BNL3994 Marker 87.2 (cM) Automated name-based View Maps
Cotton - HDC - 4 BNL3994 Marker 29.6 (cM) Automated name-based View Maps
Cotton - HDC - 22 BNL3994 Marker 52 (cM) Automated name-based View Maps
NAU3305 Marker 103.9 Cotton - E3 - 26 NAU3305 Marker 122.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3305 Marker 123.4 (cM) Automated name-based View Maps
NAU3862 Marker 27.1 Cotton - E3 - 12 NAU3862 Marker 15.4 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3862 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 12 NAU3862 Marker 29.9 (cM) Automated name-based View Maps
Cotton - HDC - 12 NAU3862 Marker 26.1 (cM) Automated name-based View Maps
Cotton - HDC - 26 NAU3862 Marker 31.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr08 NAU3862 Marker Cotton 3,208,711 - 3,209,504 (bp) Automated name-based View Maps
BNL2578 Marker 25.7 Cotton - HDC - 26 BNL2578 Marker 29.5 (cM) Automated name-based View Maps
Cotton - E3 - 12 BNL2578 Marker 32.6 (cM) Automated name-based View Maps
Cotton - HDC - 12 BNL2578 Marker 26.8 (cM) Automated name-based View Maps
NAU4081 Marker 11.5 Cotton - E3 - 26 NAU4081 Marker 60.6 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4602 Marker 89.5 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU4602 Marker 70 (cM) Automated name-based View Maps
Cotton - HDC - 26 CLU4602 Marker 13.2 (cM) Automated name-based View Maps
Cotton - TH - 15 NAU4081 Marker 70.2 (cM) Automated name-based View Maps