CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 112.1 cM
Features by Type:
54 Marker
54 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 54.       of 3 | Next
Cotton - TH - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
JESPR101 Marker 49.7 Cotton - T3 - 17 JESPR101 Marker 43.57 (cM) Automated name-based View Maps
Cotton - CH - 17 JESPR101 Marker 69.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 JESPR101a Marker 30.32 (cM) Automated name-based View Maps
Cotton - GVc - 17 JESPR101 Marker 28.2 (cM) Automated name-based View Maps
Cotton - E3 - 2 JESPR101 Marker 76 (cM) Automated name-based View Maps
Cotton - TH - 17 JESPR101 Marker 52.3 (cM) Automated name-based View Maps
Cotton - GVc - 2 JESPR101 Marker 43.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 JESPR101b Marker 35.67 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR101 Marker 60.15 (cM) Automated name-based View Maps
Cotton - HDC - 17 JESPR101 Marker 70.5 (cM) Automated name-based View Maps
Cotton - CH - 2 JESPR101 Marker 39 (cM) Automated name-based View Maps
Cotton - HDC - 2 JESPR101 Marker 65.2 (cM) Automated name-based View Maps
BNL3590 Marker 50.7 Cotton - HDC - 17 BNL3590 Marker 52.9 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 BNL3590 Marker Cotton 18,634,806 - 18,635,181 (bp) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - HDC - 17 BNL3590 Marker 70.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 BNL3590 Marker 65.7 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
NAU6132 Marker 50.9 Cotton - HDC - 10 NAU6132 Marker 75.5 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU6132 Marker 60.5 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU6132 Marker 64 (cM) Automated name-based View Maps
Y1340-900 Marker 51.2 Cotton - HDC - 2 Y1340-900 Marker 59.4 (cM) Automated name-based View Maps
NAU3875 Marker 51.6 Cotton - Guazuncho2xVH8-RIL - c2 NAU3875 Marker 40.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3875 Marker 57.8 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU3875 Marker 80.1 (cM) Automated name-based View Maps
Cotton - HDC - 17 NAU3875 Marker 89.6 (cM) Automated name-based View Maps
Cotton - TH - 17 NAU3875 Marker 42.3 (cM) Automated name-based View Maps
Cotton - GVc - 2 NAU3875 Marker 48.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr13 NAU3875 Marker Cotton 21,039,571 - 21,040,316 (bp) Automated name-based View Maps
NAU3626 Marker 51.7 Cotton - HDC - 2 NAU3626 Marker 57.7 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU3626 Marker 81 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr03 NAU3626 Marker Cotton 10,028,858 - 10,029,520 (bp) Automated name-based View Maps
BNL3413 Marker 51.8 Cotton - GVc - 2 BNL3413 Marker 43.3 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU35 Marker 65 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 BNL3413 Marker 34.96 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU35 Marker 71.1 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3413 Marker 58.1 (cM) Automated name-based View Maps
BNL3523 Marker 51.9 Cotton - HDC - 2 BNL3523 Marker 57.5 (cM) Automated name-based View Maps
Cotton - HDC - 14 BNL3523 Marker 75.4 (cM) Automated name-based View Maps
Cotton - E3 - 14 BNL3523 Marker 42.3 (cM) Automated name-based View Maps
SABPL01-170 Marker 52 Cotton - HDC - 2 SABPL01-170 Marker 57.4 (cM) Automated name-based View Maps
NAU5134 Marker 52.2 Cotton - Graimondii_physical - Gr_Chr03 NAU5134 Marker Cotton 18,049,628 - 18,050,554 (bp) Automated name-based View Maps
Cotton - HDC - 2 NAU5134 Marker 57.1 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU5134 Marker 65.6 (cM) Automated name-based View Maps
NAU2994 Marker 52.2 Cotton - TH - 17 NAU2994 Marker 55.7 (cM) Automated name-based View Maps
Cotton - E3 - 17 NAU2994 Marker 83.2 (cM) Automated name-based View Maps
Cotton - HDC - 17 CLU2630 Marker 77.7 (cM) Automated name-based View Maps
Cotton - HDC - 2 CLU2630 Marker 57.1 (cM) Automated name-based View Maps
NAU6316 Marker 52.4 Cotton - TH - 14 NAU6316 Marker 66.4 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU6316 Marker 75.2 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU6316 Marker 56.9 (cM) Automated name-based View Maps
NAU1072 Marker 52.5 Cotton - HDC - 2 CLU3544 Marker 56.8 (cM) Automated name-based View Maps
NAU2817 Marker 52.9 Cotton - Graimondii_physical - Gr_Chr03 NAU2817 Marker Cotton 24,014,518 - 24,015,229 (bp) Automated name-based View Maps
Cotton - HDC - 2 NAU2817 Marker 56.3 (cM) Automated name-based View Maps
me4em1-220 Marker 53.3 Cotton - HDC - 2 me4em1-220 Marker 55.9 (cM) Automated name-based View Maps
TMK08-175 Marker 53.5 Cotton - HDC - 2 TMK08-175 Marker 55.7 (cM) Automated name-based View Maps
me2em3-260 Marker 54.1 Cotton - HDC - 2 me2em3-260 Marker 55 (cM) Automated name-based View Maps
NAU3485 Marker 55.7 Cotton - E3 - 2 NAU3485 Marker 70.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU3485 Marker 77.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr05 NAU3485 Marker Cotton 9,214,657 - 9,215,376 (bp) Automated name-based View Maps
Cotton - TH - 14 NAU3485 Marker 72.8 (cM) Automated name-based View Maps
Cotton - E3 - 14 NAU3485 Marker 52.1 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3485 Marker 53.1 (cM) Automated name-based View Maps
DC1SA21-380 Marker 57.3 Cotton - HDC - 2 DC1SA21-380 Marker 51.3 (cM) Automated name-based View Maps
NAU3189 Marker 58 Cotton - HDC - 26 NAU3189 Marker 62.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr04 NAU3189 Marker Cotton 8,487,770 - 8,488,502 (bp) Automated name-based View Maps
Cotton - E3 - 26 NAU3189 Marker 29.1 (cM) Automated name-based View Maps
Cotton - HDC - 14 NAU3189 Marker 78.4 (cM) Automated name-based View Maps
Cotton - HDC - 2 NAU3189 Marker 50.5 (cM) Automated name-based View Maps
Cotton - E3 - 2 NAU3189 Marker 68.9 (cM) Automated name-based View Maps
Cotton - TH - 14 NAU3189 Marker 77.2 (cM) Automated name-based View Maps
Cotton - TH - 26 NAU3189 Marker 52.5 (cM) Automated name-based View Maps
OD3GA19-180 Marker 59.8 Cotton - HDC - 2 OD3GA19-180 Marker 48.5 (cM) Automated name-based View Maps
NAU1489 Marker 60.3 Cotton - HDC - 2 NAU1489 Marker 47.9 (cM) Automated name-based View Maps
JESPR179 Marker 61.4 Cotton - Graimondii_physical - Gr_Chr05 JESPR179 Marker Cotton 7,198,531 - 7,199,048 (bp) Automated name-based View Maps
Cotton - HDC - 2 JESPR179 Marker 69.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c2 JESPR179a Marker 24.57 (cM) Automated name-based View Maps
Cotton - GVc - 14 JESPR179 Marker 38.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 JESPR179 Marker 51.1 (cM) Automated name-based View Maps
Cotton - GVc - 2 JESPR179 Marker 35.6 (cM) Automated name-based View Maps
Cotton - HDC - 14 JESPR179 Marker 89.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 JESPR179 Marker 76.19 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c14 JESPR179 Marker 37.8 (cM) Automated name-based View Maps
DC1GA5-240 Marker 66 Cotton - HDC - 2 DC1GA5-240 Marker 41.4 (cM) Automated name-based View Maps
NAU0854 Marker 66.7 Cotton - HDC - 2 NAU0854 Marker 40.6 (cM) Automated name-based View Maps