CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 6
Map Start: 0 cM
Map Stop: 143.7 cM
Features by Type:
69 Marker
69 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 69.       of 3 | Next
Cotton - TH - 6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
JESPR163 Marker 65.9 Cotton - Graimondii_physical - Gr_Chr10 JESPR163 Marker Cotton 46,525,688 - 46,526,254 (bp) Automated name-based View Maps
Cotton - HDC - 6 JESPR163 Marker 95.7 (cM) Automated name-based View Maps
Cotton - HDC - 13 JESPR163 Marker 59.2 (cM) Automated name-based View Maps
Cotton - TH - 13 JESPR163 Marker 60.5 (cM) Automated name-based View Maps
Cotton - CH - 6 JESPR163 Marker 97.7 (cM) Automated name-based View Maps
BNL1064 Marker 64.7 Cotton - T3 - 6 BNL1064 Marker 56.46 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL1064 Marker 88.1 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL1064 Marker 90.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL1064 Marker 148 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL1064 Marker Cotton 26,566,573 - 26,566,814 (bp) Automated name-based View Maps
Cotton - E3 - 6 BNL1064 Marker 93.4 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL1064 Marker 63 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 BNL1064 Marker 25.34 (cM) Automated name-based View Maps
Cotton - PK - c6 BNL1064 Marker 58 (cM) Automated name-based View Maps
me5OD12-130 Marker 63.3 Cotton - HDC - 6 me5OD12-130 Marker 91.3 (cM) Automated name-based View Maps
BNL1015 Marker 63.9 Cotton - HDC - 6 BNL1015 Marker 92.3 (cM) Automated name-based View Maps
NAU6185 Marker 62.7 Cotton - TH - 13 NAU6185 Marker 57.5 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU6185 Marker 90.3 (cM) Automated name-based View Maps
Cotton - HDC - 13 NAU6185 Marker 64.8 (cM) Automated name-based View Maps
NAU2473 Marker 61.8 Cotton - HDC - 6 CLU3993 Marker 88.8 (cM) Automated name-based View Maps
BNL3295 Marker 62.1 Cotton - E3 - 6 BNL3295 Marker 87.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 BNL3295 Marker 87.6 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL3295 Marker 55.88 (cM) Automated name-based View Maps
BNL4108 Marker 61.5 Cotton - HDC - 6 BNL4108 Marker 88.3 (cM) Automated name-based View Maps
Cotton - T3 - 6 BNL4108 Marker 56.75 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 BNL4108 Marker 148 (cM) Automated name-based View Maps
Cotton - GVc - 6 BNL4108 Marker 64.1 (cM) Automated name-based View Maps
Cotton - CH - 6 BNL4108 Marker 88.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 BNL4108 Marker Cotton 31,336,680 - 31,336,923 (bp) Automated name-based View Maps
me2em3-210 Marker 61.1 Cotton - HDC - 6 me2em3-210 Marker 88.1 (cM) Automated name-based View Maps
CIR086 Marker 61.4 Cotton - Guazuncho2xVH8-BC1 - D08 CIR086 Marker 38.4 (cM) Automated name-based View Maps
Cotton - T3 - 6 CIR086 Marker 58.11 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR086 Marker 89.8 (cM) Automated name-based View Maps
Cotton - HDC - 19 CIR086 Marker 157.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 CIR086 Marker 32.2 (cM) Automated name-based View Maps
EM1OD30-230 Marker 61 Cotton - HDC - 6 EM1OD30-230 Marker 88 (cM) Automated name-based View Maps
NAU6110 Marker 60.5 Cotton - HDC - 6 NAU6110 Marker 87.8 (cM) Automated name-based View Maps
Y4004-300 Marker 60.6 Cotton - HDC - 6 Y4004-300 Marker 87.8 (cM) Automated name-based View Maps
NAU0905 Marker 60.3 Cotton - T3 - 6 NAU0905 Marker 50.83 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU0905 Marker 78.1 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU0905 Marker 49.6 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU0905 Marker 69.6 (cM) Automated name-based View Maps
Cotton - HDC - 6 NAU0905 Marker 83.3 (cM) Automated name-based View Maps
Cotton - HDC - 25 NAU0905 Marker 109 (cM) Automated name-based View Maps
Cotton - T3 - 25 NAU0905 Marker 51.35 (cM) Automated name-based View Maps
NAU2128 Marker 59.8 Cotton - HDC - 6 CLU752 Marker 87.4 (cM) Automated name-based View Maps
NAU2238 Marker 60 Cotton - T3 - 25 NAU2238 Marker 55.97 (cM) Automated name-based View Maps
Cotton - HDC - 25 CLU3879 Marker 74.4 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU3879 Marker 87.5 (cM) Automated name-based View Maps
Cotton - TH - 25 NAU2238 Marker 48.2 (cM) Automated name-based View Maps
Cotton - T3 - 6 NAU2238 Marker 55.75 (cM) Automated name-based View Maps
STV027 Marker 59.5 Cotton - HDC - 6 CLU1111 Marker 87.1 (cM) Automated name-based View Maps
CIR291 Marker 59 Cotton - HDC - 10 CIR291 Marker 98.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c8 CIR291a Marker 49.39 (cM) Automated name-based View Maps
Cotton - GVc - 10 CIR291 Marker 57 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 CIR291 Marker 31.6 (cM) Automated name-based View Maps
Cotton - HDC - 13 CIR291 Marker 60.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c6 CIR291f Marker 27.85 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A02 CIR291 Marker 181.3 (cM) Automated name-based View Maps
Cotton - HDC - 6 CIR291 Marker 88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR291b Marker 34.04 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c6 CIR291 Marker 143.6 (cM) Automated name-based View Maps
Cotton - GVc - 12 CIR291 Marker 103.2 (cM) Automated name-based View Maps
Cotton - GVc - 9 CIR291 Marker 29 (cM) Automated name-based View Maps
Cotton - HDC - 4 CIR291 Marker 43.7 (cM) Automated name-based View Maps
Cotton - HDC - 12 CIR291 Marker 44.9 (cM) Automated name-based View Maps
Cotton - TH - 8 CIR291 Marker 83.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 CIR291 Marker 95.9 (cM) Automated name-based View Maps
Cotton - GVc - 6 CIR291 Marker 64.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 CIR291u Marker 56.36 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR291 Marker 48.4 (cM) Automated name-based View Maps
Cotton - HDC - 8 CIR291 Marker 108.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c10 CIR291 Marker 59.1 (cM) Automated name-based View Maps
Cotton - GVc - 8 CIR291 Marker 125.2 (cM) Automated name-based View Maps
Cotton - HDC - 9 CIR291 Marker 40 (cM) Automated name-based View Maps
Cotton - GVc - 13 CIR291 Marker 92 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A01 CIR291 Marker 147 (cM) Automated name-based View Maps
Cotton - TH - 10 CIR291 Marker 54.7 (cM) Automated name-based View Maps
NAU3524 Marker 59.2 Cotton - HDC - 6 NAU3524 Marker 86.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 NAU3524 Marker Cotton 47,632,696 - 47,633,326 (bp) Automated name-based View Maps
JESPR194 Marker 58.6 Cotton - E3 - 6 JESPR194 Marker 101.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr10 JESPR194 Marker Cotton 53,566,772 - 53,567,169 (bp) Automated name-based View Maps
Cotton - HDC - 6 JESPR194 Marker 86.4 (cM) Automated name-based View Maps
NAU1218 Marker 57.7 Cotton - T3 - 6 NAU1218 Marker 53.75 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU3616 Marker 85.8 (cM) Automated name-based View Maps
DC1OD24-215 Marker 58.1 Cotton - HDC - 6 DC1OD24-215 Marker 86.1 (cM) Automated name-based View Maps
NAU5433 Marker 57.4 Cotton - HDC - 6 CLU4928 Marker 85.6 (cM) Automated name-based View Maps
Cotton - E3 - 6 NAU5433 Marker 98.8 (cM) Automated name-based View Maps
Y2398 Marker 56.4 Cotton - HDC - 6 Y2398 Marker 85 (cM) Automated name-based View Maps
NAU5434 Marker 57 Cotton - E3 - 6 NAU5434 Marker 98.8 (cM) Automated name-based View Maps
Cotton - HDC - 6 CLU4928 Marker 85.6 (cM) Automated name-based View Maps