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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-TH
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - TH [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 98 cM
Features by Type:
63 Marker
63 Total

Map Features

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Items 1 to 25 of 63.       of 3 | Next
Cotton - TH - 7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
NAU4082 Marker 91.4 Cotton - HDC - 7 CLU1460 Marker 35.5 (cM) Automated name-based View Maps
Cotton - E3 - 7 NAU4082 Marker 104.5 (cM) Automated name-based View Maps
NAU3582 Marker 96.1 Cotton - HDC - 7 CLU4331 Marker 28.6 (cM) Automated name-based View Maps
NAU2308 Marker 98 Cotton - Graimondii_physical - Gr_Chr01 NAU2308 Marker Cotton 52,610,340 - 52,610,891 (bp) Automated name-based View Maps
Cotton - HDC - 7 NAU2308 Marker 25.9 (cM) Automated name-based View Maps
NAU0933 Marker 0 Cotton - HDC - 7 NAU0933 Marker 168.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU0933 Marker Cotton 1,706,864 - 1,707,234 (bp) Automated name-based View Maps
NAU4030 Marker 13 Cotton - TH - 16 NAU4030 Marker 18.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU1419 Marker 114.1 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU1419 Marker 149.8 (cM) Automated name-based View Maps
BNL1022 Marker 19.7 Cotton - E3 - 16 BNL1022 Marker 28 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1022 Marker 112.2 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1022 Marker 21.3 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1022 Marker 140 (cM) Automated name-based View Maps
NAU3654 Marker 22.7 Cotton - HDC - 7 NAU3654 Marker 135.6 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU3654 Marker Cotton 4,080,449 - 4,081,228 (bp) Automated name-based View Maps
NAU0845 Marker 26 Cotton - HDC - 7 NAU0845 Marker 130.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 NAU0845 Marker 107.4 (cM) Automated name-based View Maps
NAU3918 Marker 26.9 Cotton - HDC - 7 NAU3918 Marker 129.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU3918 Marker Cotton 7,604,032 - 7,604,910 (bp) Automated name-based View Maps
NAU5303 Marker 27 Cotton - Graimondii_physical - Gr_Chr01 NAU5303 Marker Cotton 3,763,794 - 3,764,495 (bp) Automated name-based View Maps
Cotton - HDC - 7 NAU5303 Marker 129.4 (cM) Automated name-based View Maps
NAU5152 Marker 28.5 Cotton - HDC - 7 NAU5152 Marker 127.2 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU5152 Marker 34 (cM) Automated name-based View Maps
Cotton - E3 - 7 NAU5152 Marker 4 (cM) Automated name-based View Maps
Cotton - E3 - 16 NAU5152 Marker 38.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU5152 Marker 102.4 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU5152 Marker Cotton 4,196,429 - 4,197,369 (bp) Automated name-based View Maps
NAU0474 Marker 30.9 Cotton - HDC - 7 NAU0474 Marker 123.7 (cM) Automated name-based View Maps
NAU2685 Marker 32.4 Cotton - HDC - 10 CLU4087 Marker 95.9 (cM) Automated name-based View Maps
Cotton - E3 - 7 NAU2685 Marker 17.5 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU4087 Marker 120.8 (cM) Automated name-based View Maps
NAU2686 Marker 32.9 Cotton - HDC - 7 CLU4087 Marker 120.8 (cM) Automated name-based View Maps
Cotton - TH - 10 NAU2686 Marker 58.4 (cM) Automated name-based View Maps
Cotton - HDC - 10 CLU4087 Marker 95.9 (cM) Automated name-based View Maps
NAU2657 Marker 34.7 Cotton - HDC - 7 CLU1503 Marker 118.1 (cM) Automated name-based View Maps
Cotton - E3 - 7 NAU2657 Marker 20.2 (cM) Automated name-based View Maps
BNL3793 Marker 39 Cotton - HDC - 7 BNL3793 Marker 111.9 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3793 Marker Cotton 6,876,491 - 6,877,038 (bp) Automated name-based View Maps
Cotton - HDC - 16 BNL3793 Marker 90.8 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL3793 Marker 37.07 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL3793 Marker 44.24 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL3793 Marker 65.6 (cM) Automated name-based View Maps
NAU2862 Marker 39.6 Cotton - HDC - 16 CLU4153 Marker 91.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU4153 Marker 110.5 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU2862 Marker 47.8 (cM) Automated name-based View Maps
NAU2863 Marker 40.8 Cotton - E3 - 7 NAU2863 Marker 26.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU4153 Marker 91.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU4153 Marker 110.5 (cM) Automated name-based View Maps
NAU3735 Marker 41.4 Cotton - HDC - 7 NAU3735 Marker 110 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 NAU3735 Marker Cotton 7,370,543 - 7,371,331 (bp) Automated name-based View Maps
Cotton - E3 - 7 NAU3735 Marker 27.5 (cM) Automated name-based View Maps
NAU1048 Marker 42 Cotton - HDC - 7 CLU3427 Marker 108.8 (cM) Automated name-based View Maps
Cotton - CH - 7 NAU1048 Marker 146.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU3427 Marker 109.5 (cM) Automated name-based View Maps
Cotton - T3 - 7 NAU1048 Marker 46.14 (cM) Automated name-based View Maps
Cotton - CH - 7 NAU1048 Marker 149.9 (cM) Automated name-based View Maps
NAU0845 Marker 42.8 Cotton - HDC - 7 NAU0845 Marker 130.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 NAU0845 Marker 107.4 (cM) Automated name-based View Maps
R2 Marker 44.7 Cotton - GVc - 7 R2 Marker 74.7 (cM) Automated name-based View Maps
Cotton - HDC - 7 R2 Marker 102.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 R2 Marker 42.88 (cM) Automated name-based View Maps
NAU3028 Marker 45.9 Cotton - HDC - 7 CLU4215 Marker 101.6 (cM) Automated name-based View Maps
NAU2887 Marker 48.4 Cotton - HDC - 8 CLU1166 Marker 65.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU1166 Marker 99.9 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU2887 Marker 61.5 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU1166 Marker 83.2 (cM) Automated name-based View Maps
Cotton - E3 - 8 NAU2887 Marker 78 (cM) Automated name-based View Maps
NAU3380 Marker 48.6 Cotton - HDC - 8 CLU1166 Marker 65.4 (cM) Automated name-based View Maps
Cotton - HDC - 7 CLU1166 Marker 99.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU1166 Marker 83.2 (cM) Automated name-based View Maps