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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cocoa-(Sca6xH)xC1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps LG7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cocoa - (Sca6xH)xC1 [ View Map Set Info ]
Map Name: LG7
Map Start: 0 cM
Map Stop: 60.1 cM
Features by Type:
22 Marker
1 QTL
23 Total

Map Features

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Items 1 to 23 of 23.
Cocoa - (Sca6xH)xC1 - LG7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AFLP_SxHxC4/7 Marker 60.1 No other positions
AFLP_SxHxC12/15 Marker 45.4 No other positions
AFLP_SxHxC9/7 Marker 43.2 No other positions
AFLP_SxHxC1/1 Marker 42.2 No other positions
AFLP_SxHxC9/1 Marker 36.4 No other positions
AFLP_SxHxC15/5 Marker 32.6 No other positions
AFLP_SxHxC15/13 Marker 23.2 No other positions
AFLP_SxHxC9/14 Marker 17.1 No other positions
AFLP_SxHxC4/11 Marker 15.5 No other positions
AFLP_SxHxC11/12 Marker 10.4 No other positions
AFLP_SxHxC6/9 Marker 9.7 No other positions
AFLP_SxHxC8/8 Marker 8.8 No other positions
AFLP_SxHxC13/14 Marker 8.5 No other positions
AFLP_SxHxC13/3 Marker 7.5 No other positions
AFLP_SxHxC6/3 Marker 7.1 No other positions
AFLP_SxHxC13/4 Marker 6.7 No other positions
AFLP_SxHxC13/18 Marker 6.3 No other positions
AFLP_SxHxC5/7 Marker 5.8 No other positions
AFLP_SxHxC4/14 Marker 5.2 No other positions
AFLP_SxHxC13/10 Marker 4.3 No other positions
AFLP_SxHxC6/12 Marker 0 No other positions
mTcCIR7 Marker 27.9 Cocoa - consensus_disease_res - LG7 mTcCIR7 Marker 25.9 (cM) Automated name-based View Maps
Cocoa - test - LG7 mTcCIR7 Marker 25.9 (cM) Automated name-based View Maps
Cocoa - ref_UPA402xUF676 - LG7 mTcCIR7 Marker 25.9 (cM) Automated name-based View Maps
Cocoa - DR1xCatongo - LG7 mTcCIR7 Marker 42.6 (cM) Automated name-based View Maps
SHC_P.megakarya_NS-269_lg7 QTL 1 - 6 No other positions