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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Banana-AF_PAHANG
(Reference Set)
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Correspondences
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Maps LG03
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Banana - AF_PAHANG [ View Map Set Info ]
Map Name: LG03
Map Start: 0 cM
Map Stop: 153.87 cM
Features by Type:
29 Marker
29 Total

Map Features

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Items 1 to 25 of 29.       of 2 | Next
Banana - AF_PAHANG - LG03
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mMaCIR1474 Marker 77.2 Banana - physical_map - chr3 mMaCIR1474 Marker Musa 9,856,776 - 9,858,812 (bp) Automated name-based View Maps
mMaCIR1255 Marker 84.1 Banana - physical_map - chr3 mMaCIR1255 Marker Musa 19,274,905 - 19,275,762 (bp) Automated name-based View Maps
mMaCIR2030 Marker 79 Banana - physical_map - chr3 mMaCIR2030 Marker Musa 12,311,948 - 12,313,975 (bp) Automated name-based View Maps
mMaCIR1234 Marker 111.28 Banana - physical_map - chr3 mMaCIR1234 Marker Musa 24,150,601 - 24,151,407 (bp) Automated name-based View Maps
mMaCIR2481 Marker 79 Banana - physical_map - chr3 mMaCIR2481 Marker Musa 12,550,935 - 12,552,949 (bp) Automated name-based View Maps
mMaCIR1387 Marker 148.3 Banana - physical_map - chr3 mMaCIR1387 Marker Musa 28,862,377 - 28,863,020 (bp) Automated name-based View Maps
mMaCIR2895 Marker 79 No other positions
mMaCIR2705 Marker 79 Banana - physical_map - chr3 mMaCIR2705 Marker Musa 13,550,638 - 13,552,661 (bp) Automated name-based View Maps
mMaCIR1621 Marker 79 Banana - physical_map - chr3 mMaCIR1621 Marker Musa 14,600,061 - 14,602,076 (bp) Automated name-based View Maps
mMaCIR1641 Marker 38.64 Banana - physical_map - chr3 mMaCIR1641 Marker Musa 3,517,337 - 3,519,364 (bp) Automated name-based View Maps
mMaCIR1737 Marker 79.3 Banana - physical_map - chr3 mMaCIR1737 Marker Musa 15,353,552 - 15,355,588 (bp) Automated name-based View Maps
mMaCIR1151 Marker 65.03 Banana - physical_map - chr3 mMaCIR1151 Marker Musa 7,528,781 - 7,529,487 (bp) Automated name-based View Maps
mMaCIR1337 Marker 80.69 Banana - physical_map - chr3 mMaCIR1337 Marker Musa 16,772,676 - 16,773,520 (bp) Automated name-based View Maps
mMaCIR0105 Marker 74.58 Banana - Borneo_3 - borneo_3 mMaCIR105 Marker 44.39 (cM) Automated name-based View Maps
Banana - physical_map - chr3 mMaCIR0105 Marker Musa 9,702,386 - 9,702,704 (bp) Automated name-based View Maps
Banana - Plilin_3 - plilin_3 mMaCIR105 Marker 58.04 (cM) Automated name-based View Maps
Banana - Borli - 3 mMaCIR105 Marker 50.7 (cM) Automated name-based View Maps
mMaCIR1900 Marker 83.57 Banana - physical_map - chr3 mMaCIR1900 Marker Musa 18,958,160 - 18,960,181 (bp) Automated name-based View Maps
mMaCIR2115 Marker 79 No other positions
mMaCIR0102 Marker 88.26 Banana - Borli - 3 mMaCIR102 Marker 40.22 (cM) Automated name-based View Maps
Banana - AFCAM - LinkageGroup3 mMaCIR102 Marker 30.3 (cM) Automated name-based View Maps
Banana - Plilin_3 - plilin_3 mMaCIR102 Marker 40.5 (cM) Automated name-based View Maps
Banana - Borneo_3 - borneo_3 mMaCIR102 Marker 43.05 (cM) Automated name-based View Maps
Banana - physical_map - chr3 mMaCIR0102 Marker Musa 20,284,083 - 20,284,668 (bp) Automated name-based View Maps
mMaCIR2874 Marker 79 Banana - physical_map - chr3 mMaCIR2874 Marker Musa 11,665,533 - 11,667,601 (bp) Automated name-based View Maps
mMaCIR1847 Marker 133.25 Banana - physical_map - chr3 mMaCIR1847 Marker Musa 26,833,664 - 26,834,523 (bp) Automated name-based View Maps
mMaCIR1876 Marker 79 Banana - physical_map - chr3 mMaCIR1876 Marker Musa 12,072,631 - 12,074,362 (bp) Automated name-based View Maps
mMaCIR0237 Marker 153.87 Banana - physical_map - chr3 mMaCIR0237 Marker Musa 29,161,657 - 29,162,021 (bp) Automated name-based View Maps
Banana - AFCAM - LinkageGroup3 mMaCIR237 Marker 0 (cM) Automated name-based View Maps
mMaCIR1552 Marker 79 Banana - physical_map - chr3 mMaCIR1552 Marker Musa 13,882,109 - 13,884,149 (bp) Automated name-based View Maps
mMaCIR1975 Marker 79 No other positions
mMaCIR1363 Marker 0 Banana - physical_map - chr3 mMaCIR1363 Marker Musa 1,231,453 - 1,232,237 (bp) Automated name-based View Maps
mMaCIR1658 Marker 79 Banana - physical_map - chr3 mMaCIR1658 Marker Musa 15,196,633 - 15,198,648 (bp) Automated name-based View Maps