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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_BM3
(Reference Set)
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Correspondences
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Maps 3
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_BM3 [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 149.3 cM
Features by Type:
14 Marker
3 QTL
17 Total

Map Features

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Items 1 to 17 of 17.
Maize - Genetic_map_BM3 - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
umc121 Marker 3.4 No other positions
asg48a Marker 50.9 Maize - Genetic_map_IBM2 - 3 asg48a Marker 128.2 (cM) Automated name-based, Automated name-based View Maps
umc10a Marker 65.5 Maize - Genetic_map_IF - 3 umc10a Marker 36 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 3 umc10a Marker 57 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 3 umc10a Marker 72.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc10a Marker 43.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 3 umc10a Marker 56.6 (cM) Automated name-based, Automated name-based View Maps
umc102a Marker 68.5 Maize - Genetic_map_IBM2 - 3 umc102a Marker 232.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 3 umc102a Marker 135 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 3 umc102a Marker 57.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc102a Marker 50.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc102a Marker 83.3 (cM) Automated name-based, Automated name-based View Maps
im30p1 Marker 86.2 Maize - Genetic_map_PF - 3 im30p1 Marker 65.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 3 im30p1 Marker 284.9 (cM) Automated name-based, Automated name-based View Maps
bnl6.16a Marker 119.5 Maize - Genetic_map_IBM2 - 3 bnl6.16a Marker 376.1 (cM) Automated name-based, Automated name-based View Maps
umc16a Marker 130.6 Maize - Genetic_map_C6 - 3 umc16a Marker 199.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc16a Marker 110.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_Lo1 - 3 umc16a Marker 59.9 (cM) Automated name-based, Automated name-based View Maps
asg24a(gts) Marker 23.3 Maize - Genetic_map_IBM2 - 3 asg24a(gts) Marker 91 (cM) Automated name-based, Automated name-based View Maps
umc59e Marker 52.5 Maize - Genetic_map_YY22 - 3 umc59e Marker 75.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 3 umc59e Marker 133.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 3 umc59e Marker 74.7 (cM) Automated name-based, Automated name-based View Maps
umc102a Marker 67.5 Maize - Genetic_map_KG1 - 3 umc102a Marker 57.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc102a Marker 50.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc102a Marker 83.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 3 umc102a Marker 232.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 3 umc102a Marker 135 (cM) Automated name-based, Automated name-based View Maps
umc26a Marker 76.6 Maize - Genetic_map_IBM2 - 3 umc26a Marker 258.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc26a Marker 53 (cM) Automated name-based, Automated name-based View Maps
umc60 Marker 110 Maize - Genetic_map_IBM2 - 3 umc60 Marker 327.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc60 Marker 80.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 3 umc60 Marker 81 (cM) Automated name-based, Automated name-based View Maps
umc17a Marker 129.1 Maize - Genetic_map_C5 - 3 umc17a Marker 204.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 3 umc17a Marker 426.1 (cM) Automated name-based, Automated name-based View Maps
umc63c Marker 149.3 Maize - Genetic_map_C6 - 3 umc63c Marker 226.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc63c Marker 129.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 5 umc63c Marker 231 (cM) Automated name-based, Automated name-based View Maps
15 QTL 86.2 - 98.1 No other positions
17 QTL 119.5 - 124.3 No other positions
16 QTL 119.5 - 124.3 No other positions