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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_BN6
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_BN6 [ View Map Set Info ]
Map Name: 8
Map Start: 0 cM
Map Stop: 131.9 cM
Features by Type:
8 Marker
2 QTL
10 Total

Map Features

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Items 1 to 10 of 10.
Maize - Genetic_map_BN6 - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
bnlg1352 Marker 37.5 Maize - Genetic_map_MN2a - 8 bnlg1352 Marker 27.5 (cM) Automated name-based, Automated name-based View Maps
umc1777 Marker 71.3 Maize - Genetic_map_HK3b - 8 umc1777 Marker 96.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 8 umc1777 Marker 73.4 (cM) Automated name-based, Automated name-based View Maps
mmc0181 Marker 97 Maize - Genetic_map_HK3b - 8 mmc0181 Marker 111.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 8 mmc0181 Marker 54.7 (cM) Automated name-based, Automated name-based View Maps
umc1069 Marker 131.9 No other positions
bnlg1194D Marker 19.9 No other positions
phi014 Marker 61.8 Maize - Genetic_map_MN2a - 8 phi014 Marker 44.6 (cM) Automated name-based, Automated name-based View Maps
bnlg240 Marker 93.6 Maize - Genetic_map_HK3a - 8 bnlg240 Marker 63.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 8 bnlg240 Marker 106.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_Lo1 - 8 bnlg240 Marker 71.2 (cM) Automated name-based, Automated name-based View Maps
bnlg1823D Marker 108.5 No other positions
667 QTL 97 - 108.5 No other positions
668 QTL 97 - 108.5 No other positions