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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_HC4a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HC4a [ View Map Set Info ]
Map Name: 3
Map Start: 0 cM
Map Stop: 164.8 cM
Features by Type:
4 Marker
1 QTL
5 Total

Map Features

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Items 1 to 5 of 5.
Maize - Genetic_map_HC4a - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
phi053 Marker 121.3 Maize - Genetic_map_HK3b - 3 phi053 Marker 73.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 3 phi053 Marker 148.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 3 phi053 Marker 95.3 (cM) Automated name-based, Automated name-based View Maps
umc1539 Marker 138.6 Maize - Genetic_map_IBM2 - 3 umc1539 Marker 285.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 3 umc1539 Marker 164.6 (cM) Automated name-based, Automated name-based View Maps
Gst14 Marker 128.6 No other positions
bnlg197 Marker 164.8 Maize - Genetic_map_HK3b - 3 bnlg197 Marker 136.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2a - 3 bnlg197 Marker 66.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HC4b - 3 bnlg197 Marker 164.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 3 bnlg197 Marker 43.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 3 bnlg197 Marker 379.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BN6 - 3 bnlg197 Marker 100 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 3 bnlg197 Marker 193 (cM) Automated name-based, Automated name-based View Maps
615 QTL 138.6 - 164.8 No other positions