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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_HK3a
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 4
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HK3a [ View Map Set Info ]
Map Name: 4
Map Start: 0 cM
Map Stop: 215.4 cM
Features by Type:
15 Marker
2 QTL
17 Total

Map Features

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Items 1 to 17 of 17.
Maize - Genetic_map_HK3a - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
umc1667 Marker 63.6 Maize - Genetic_map_IBM2 - 4 umc1667 Marker 346.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 4 umc1667 Marker 119.6 (cM) Automated name-based, Automated name-based View Maps
umc1299 Marker 103.1 No other positions
umc2027 Marker 111.1 Maize - Genetic_map_HK3b - 4 umc2027 Marker 85.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 4 umc2027 Marker 276.5 (cM) Automated name-based, Automated name-based View Maps
nc005 Marker 137.3 No other positions
umc1821 Marker 151.4 Maize - Genetic_map_HK3b - 4 umc1821 Marker 54.8 (cM) Automated name-based, Automated name-based View Maps
umc1017 Marker 190 Maize - Genetic_map_HK3b - 4 umc1017 Marker 6.6 (cM) Automated name-based, Automated name-based View Maps
umc1759 Marker 215.4 Maize - Genetic_map_IBM2 - 4 umc1759 Marker 85.3 (cM) Automated name-based, Automated name-based View Maps
bnlg2162 Marker 52.3 Maize - Genetic_map_IBM2 - 4 bnlg2162 Marker 368.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 4 bnlg2162 Marker 129.8 (cM) Automated name-based, Automated name-based View Maps
umc2038 Marker 83.3 Maize - Genetic_map_IBM2 - 4 umc2038 Marker 314.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 4 umc2038 Marker 102.3 (cM) Automated name-based, Automated name-based View Maps
bnlg1621 Marker 107.6 Maize - Genetic_map_FF1 - 4 bnlg1621 Marker 59.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 4 bnlg1621 Marker 88.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 4 bnlg1621 Marker 139.2 (cM) Automated name-based, Automated name-based View Maps
phi026 Marker 130.2 No other positions
umc1117 Marker 144.7 Maize - Genetic_map_HK3b - 4 umc1117 Marker 60.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 4 umc1117 Marker 204.5 (cM) Automated name-based, Automated name-based View Maps
bnlg1126 Marker 161.8 Maize - Genetic_map_HK3b - 4 bnlg1126 Marker 41.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 4 bnlg1126 Marker 139.3 (cM) Automated name-based, Automated name-based View Maps
umc1232 Marker 197.2 Maize - Genetic_map_YY22 - 4 umc1232 Marker 12.5 (cM) Automated name-based, Automated name-based View Maps
bnlg292 Marker 34.8 Maize - Genetic_map_YY22 - 4 bnlg292 Marker 206.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3b - 4 bnlg292 Marker 147.7 (cM) Automated name-based, Automated name-based View Maps
701 QTL 151.4 - 161.8 No other positions
700 QTL 137.3 - 144.7 No other positions