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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_HK3b
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 10
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HK3b [ View Map Set Info ]
Map Name: 10
Map Start: 0 cM
Map Stop: 121.7 cM
Features by Type:
15 Marker
1 QTL
16 Total

Map Features

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Items 1 to 16 of 16.
Maize - Genetic_map_HK3b - 10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
mmc0501 Marker 34.1 Maize - Genetic_map_HK3a - 10 mmc0501 Marker 82.3 (cM) Automated name-based, Automated name-based View Maps
umc1863 Marker 44.1 No other positions
umc2067 Marker 53.6 Maize - Genetic_map_YY22 - 10 umc2067 Marker 94.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 10 umc2067 Marker 63.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 10 umc2067 Marker 112.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 10 umc2067 Marker 29.8 (cM) Automated name-based, Automated name-based View Maps
umc1053 Marker 69 Maize - Genetic_map_HK3a - 10 umc1053 Marker 49.5 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 10 umc1053 Marker 98.4 (cM) Automated name-based, Automated name-based View Maps
umc2528 Marker 89.7 No other positions
bnlg1450 Marker 112.2 Maize - Genetic_map_IBM2 - 10 bnlg1450 Marker 305.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_FF1 - 10 bnlg1450 Marker 21 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 10 bnlg1450 Marker 101.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 10 bnlg1450 Marker 151.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 10 bnlg1450 Marker 196.3 (cM) Automated name-based, Automated name-based View Maps
umc1292 Marker 16.1 Maize - Genetic_map_YY22 - 1 umc1292 Marker 52.3 (cM) Automated name-based, Automated name-based View Maps
phi063 Marker 27.2 Maize - Genetic_map_HK3a - 10 phi063 Marker 90.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 10 phi063 Marker 32.3 (cM) Automated name-based, Automated name-based View Maps
phi059 Marker 39.4 Maize - Genetic_map_BM3 - 10 phi059 Marker 44.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 10 phi059 Marker 35.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 10 phi059 Marker 56.8 (cM) Automated name-based, Automated name-based View Maps
umc1962 Marker 50.5 Maize - Genetic_map_IBM2 - 10 umc1962 Marker 100 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 10 umc1962 Marker 66.5 (cM) Automated name-based, Automated name-based View Maps
umc1739 Marker 61.8 Maize - Genetic_map_IBM2 - 10 umc1739 Marker 134.3 (cM) Automated name-based, Automated name-based View Maps
umc1506 Marker 82.5 Maize - Genetic_map_IBM2 - 10 umc1506 Marker 192.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 10 umc1506 Marker 68.1 (cM) Automated name-based, Automated name-based View Maps
umc1084 Marker 99.9 Maize - Genetic_map_HK3a - 10 umc1084 Marker 19.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 10 umc1084 Marker 274.5 (cM) Automated name-based, Automated name-based View Maps
umc1569 Marker 121.7 No other positions
phi052 Marker 24.8 Maize - Genetic_map_HK3a - 10 phi052 Marker 94.9 (cM) Automated name-based, Automated name-based View Maps
693 QTL 24.8 - 44.1 No other positions