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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Maize-Genetic_map_HK3b
(Reference Set)
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Correspondences
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Maps 5
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_HK3b [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 198.2 cM
Features by Type:
21 Marker
2 QTL
23 Total

Map Features

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Items 1 to 23 of 23.
Maize - Genetic_map_HK3b - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
umc1019 Marker 144.3 Maize - Genetic_map_BN6 - 5 umc1019 Marker 99.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 umc1019 Marker 194.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 5 umc1019 Marker 170 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_MN2a - 5 umc1019 Marker 63.7 (cM) Automated name-based, Automated name-based View Maps
umc2216 Marker 153.4 No other positions
bnlg2305 Marker 166.7 Maize - Genetic_map_YY22 - 5 bnlg2305 Marker 241.1 (cM) Automated name-based, Automated name-based View Maps
umc1097 Marker 14.4 Maize - Genetic_map_YY22 - 5 umc1097 Marker 11.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 umc1097 Marker 38.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 umc1097 Marker 9.5 (cM) Automated name-based, Automated name-based View Maps
bnlg118 Marker 176.7 Maize - Genetic_map_C6 - 5 bnlg118 Marker 216.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 bnlg118 Marker 223.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 bnlg118 Marker 463.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BN6 - 5 bnlg118 Marker 132.3 (cM) Automated name-based, Automated name-based View Maps
bnlg565 Marker 50.2 Maize - Genetic_map_IBM2 - 5 bnlg565 Marker 120.1 (cM) Automated name-based, Automated name-based View Maps
umc2209 Marker 198.2 No other positions
bnlg1046 Marker 68.2 Maize - Genetic_map_IBM2 - 5 bnlg1046 Marker 174.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 bnlg1046 Marker 108.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 5 bnlg1046 Marker 71.7 (cM) Automated name-based, Automated name-based View Maps
umc2400 Marker 95.4 No other positions
bnlg1208 Marker 109.3 Maize - Genetic_map_IBM2 - 5 bnlg1208 Marker 256.7 (cM) Automated name-based, Automated name-based View Maps
umc1722 Marker 140 Maize - Genetic_map_HK3a - 5 umc1722 Marker 189.5 (cM) Automated name-based, Automated name-based View Maps
phi087 Marker 148.9 Maize - Genetic_map_HK3a - 5 phi087 Marker 198.9 (cM) Automated name-based, Automated name-based View Maps
bnlg1346 Marker 163.8 Maize - Genetic_map_HK3a - 5 bnlg1346 Marker 211.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 5 bnlg1346 Marker 199.4 (cM) Automated name-based, Automated name-based View Maps
umc1253 Marker 5.6 Maize - Genetic_map_YW4 - 5 umc1253 Marker 9.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 umc1253 Marker 49.2 (cM) Automated name-based, Automated name-based View Maps
umc1072 Marker 172.3 Maize - Genetic_map_YW4 - 5 umc1072 Marker 228.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 5 umc1072 Marker 134.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YY22 - 5 umc1072 Marker 249.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 umc1072 Marker 453.9 (cM) Automated name-based, Automated name-based View Maps
bnlg1006 Marker 18.3 Maize - Genetic_map_YY22 - 5 bnlg1006 Marker 21.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 bnlg1006 Marker 33.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 bnlg1006 Marker 14.1 (cM) Automated name-based, Automated name-based View Maps
bnlg1885 Marker 191.9 Maize - Genetic_map_C6 - 5 bnlg1885 Marker 244.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 bnlg1885 Marker 239.8 (cM) Automated name-based, Automated name-based View Maps
umc2388 Marker 64.2 No other positions
umc1692 Marker 85.1 Maize - Genetic_map_YY22 - 5 umc1692 Marker 114.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_YW4 - 5 umc1692 Marker 49.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 umc1692 Marker 132.4 (cM) Automated name-based, Automated name-based View Maps
bnlg653 Marker 98.9 Maize - Genetic_map_FF1 - 5 bnlg653 Marker 105.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_HK3a - 5 bnlg653 Marker 156 (cM) Automated name-based, Automated name-based View Maps
umc1171 Marker 122.2 Maize - Genetic_map_HK3a - 5 umc1171 Marker 173.3 (cM) Automated name-based, Automated name-based View Maps
681 QTL 50.2 - 64.2 No other positions
682 QTL 85.1 - 95.4 No other positions