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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_PF
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_PF [ View Map Set Info ]
Map Name: 2
Map Start: 0 cM
Map Stop: 144.6 cM
Features by Type:
8 Marker
1 QTL
9 Total

Map Features

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Items 1 to 9 of 9.
Maize - Genetic_map_PF - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
csu110d Marker 53.4 No other positions
sam2 Marker 58.4 Maize - Genetic_map_IBM2 - 2 sam2 Marker 208.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IF - 2 sam2 Marker 48.29 (cM) Automated name-based, Automated name-based View Maps
csu4a Marker 73.8 No other positions
csu109a Marker 144.6 Maize - Genetic_map_C6 - 2 csu109a Marker 196.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 2 csu109a Marker 228.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 2 csu109a Marker 195 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 2 csu109a Marker 195.5 (cM) Automated name-based, Automated name-based View Maps
csu40(grx) Marker 55 Maize - Genetic_map_C6 - 2 csu40(grx) Marker 88 (cM) Automated name-based, Automated name-based View Maps
prp2 Marker 65.3 Maize - Genetic_map_YY22 - 2 prp2 Marker 32.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 2 prp2 Marker 90 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_KG1 - 2 prp2 Marker 73.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 2 prp2 Marker 94.6 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 2 prp2 Marker 90.3 (cM) Automated name-based, Automated name-based View Maps
eif5a Marker 109.6 No other positions
umc32c Marker 144.6 No other positions
544 QTL 65.3 No other positions