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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_PF
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_PF [ View Map Set Info ]
Map Name: 9
Map Start: 0 cM
Map Stop: 94.2 cM
Features by Type:
8 Marker
1 QTL
9 Total

Map Features

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Items 1 to 9 of 9.
Maize - Genetic_map_PF - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
npi416 Marker 45.6 No other positions
npi293a Marker 56.3 No other positions
npi443 Marker 68.8 No other positions
npi291 Marker 94.2 No other positions
umc109 Marker 3.3 Maize - Genetic_map_C5 - 9 umc109 Marker 4.7 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 9 umc109 Marker 5.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 9 umc109 Marker 5 (cM) Automated name-based, Automated name-based View Maps
npi454 Marker 45.6 No other positions
npi427a Marker 65.5 No other positions
npi403a Marker 90.7 No other positions
556 QTL 94.2 No other positions