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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr02
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr02
Map Start: 0 bp
Map Stop: 62,737,583 bp
Features by Type:
258 Marker Cotton
258 Total

Map Features

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Items 1 to 25 of 258.       of 11 | Next
Cotton - Graimondii_physical - Gr_Chr02
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1097 Marker Cotton 49,090,241 - 49,091,885 Cotton - PK - c1 A1097 Marker 72.4 (cM) Automated name-based View Maps
A1109 Marker Cotton 39,012,679 - 39,014,012 Cotton - PK - c15 A1109 Marker 67.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 A1109 Marker 91 (cM) Automated name-based View Maps
Cotton - GVc - 15 A1109 Marker 54.7 (cM) Automated name-based View Maps
A1155 Marker Cotton 58,192,946 - 58,194,155 Cotton - PK - c1 A1155 Marker 57.9 (cM) Automated name-based View Maps
A1197 Marker Cotton 8,065,428 - 8,067,198 Cotton - GVc - 24 A1197 Marker 110.2 (cM) Automated name-based View Maps
Cotton - PK - D03 A1197 Marker 146.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D03 A1197 Marker 144.8 (cM) Automated name-based View Maps
A1204 Marker Cotton 10,735,786 - 10,736,302 Cotton - PK - c1 A1204 Marker 145.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 A1204 Marker 183.8 (cM) Automated name-based View Maps
Cotton - PK - c1 A1204 Marker 131.6 (cM) Automated name-based View Maps
Cotton - GVc - 1 A1204 Marker 96 (cM) Automated name-based View Maps
A1225 Marker Cotton 47,305,164 - 47,305,729 Cotton - PK - c15 A1225 Marker 63.4 (cM) Automated name-based View Maps
A1257 Marker Cotton 57,323,817 - 57,325,231 Cotton - PK - c1 A1257 Marker 64.1 (cM) Automated name-based View Maps
A1296 Marker Cotton 29,876,804 - 29,878,595 Cotton - Guazuncho2xVH8-BC1 - D02 A1296 Marker 109.5 (cM) Automated name-based View Maps
Cotton - GVc - 21 A1296 Marker 72.5 (cM) Automated name-based View Maps
Cotton - PK - D02 A1296 Marker 65.1 (cM) Automated name-based View Maps
A1340 Marker Cotton 10,901,839 - 10,902,458 Cotton - PK - c15 A1340 Marker 90.4 (cM) Automated name-based View Maps
A1485 Marker Cotton 60,213,673 - 60,214,262 Cotton - Guazuncho2xVH8-BC1 - c15 A1485 Marker 22.9 (cM) Automated name-based View Maps
Cotton - PK - c1 A1485 Marker 39.3 (cM) Automated name-based View Maps
Cotton - GVc - 15 A1485 Marker 19.3 (cM) Automated name-based View Maps
A1593 Marker Cotton 15,292,271 - 15,293,461 Cotton - Guazuncho2xVH8-BC1 - c1 A1593 Marker 158.3 (cM) Automated name-based View Maps
Cotton - GVc - 1 A1593 Marker 76.3 (cM) Automated name-based View Maps
Cotton - PK - c1 A1593 Marker 112 (cM) Automated name-based View Maps
A1643 Marker Cotton 8,114,743 - 8,114,999 Cotton - PK - c1 A1643 Marker 135.4 (cM) Automated name-based View Maps
Cotton - PK - c15 A1643 Marker 96.7 (cM) Automated name-based View Maps
A1720 Marker Cotton 23,603,886 - 23,604,324 Cotton - PK - c15 A1720 Marker 72.2 (cM) Automated name-based View Maps
A1738 Marker Cotton 43,126,462 - 43,126,718 Cotton - PK - c15 A1738 Marker 67.7 (cM) Automated name-based View Maps
A1794 Marker Cotton 51,290,237 - 51,291,977 Cotton - PK - c1 A1794 Marker 76.6 (cM) Automated name-based View Maps
BNL0786 Marker Cotton 11,181,156 - 11,181,435 Cotton - TH - 15 BNL0786 Marker 42.1 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL0786 Marker 125.1 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL0786 Marker 89.5 (cM) Automated name-based View Maps
Cotton - T3 - 15 BNL0786 Marker 45.15 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL0786 Marker 53.92 (cM) Automated name-based View Maps
BNL0830 Marker Cotton 11,985,657 - 11,985,899 Cotton - GVc - 15 BNL0830 Marker 91.9 (cM) Automated name-based View Maps
BNL1438 Marker Cotton 28,492,389 - 28,492,621 Cotton - Guazuncho2xVH8-BC1 - A01 BNL1438 Marker 147 (cM) Automated name-based View Maps
Cotton - TH - 13 BNL1438 Marker 59.9 (cM) Automated name-based View Maps
Cotton - E3 - 13 BNL1438 Marker 121.1 (cM) Automated name-based View Maps
Cotton - GVc - 13 BNL1438 Marker 92 (cM) Automated name-based View Maps
Cotton - CH - 13 BNL1438 Marker 84.5 (cM) Automated name-based View Maps
BNL1666 Marker Cotton 47,179,834 - 47,180,121 Cotton - T3 - 15 BNL1666 Marker 67.17 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL1666 Marker 83.9 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL1666 Marker 66 (cM) Automated name-based View Maps
BNL2440 Marker Cotton 61,637,363 - 61,637,761 Cotton - GVc - 15 BNL2440 Marker 6.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c1 BNL2440b Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 15 BNL2440 Marker 123.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c1 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - CH - 15 BNL2440 Marker 18 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL2440 Marker 7.1 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL2440 Marker 16.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL2440 Marker 6.6 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL2440 Marker 9.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c15 BNL2440 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c15 BNL2440a Marker 3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL2440 Marker 25.4 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL2440 Marker 0 (cM) Automated name-based View Maps
BNL2564 Marker Cotton 24,401,548 - 24,402,069 Cotton - E3 - 1 BNL2564 Marker 37.8 (cM) Automated name-based View Maps
Cotton - E3 - 15 BNL2564 Marker 75.3 (cM) Automated name-based View Maps
BNL2700 Marker Cotton 52,774,178 - 52,774,747 Cotton - E3 - 15 BNL2700 Marker 62.8 (cM) Automated name-based View Maps
BNL2921 Marker Cotton 27,353,761 - 27,354,213 Cotton - T3 - 1 BNL2921 Marker 63.24 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL2921 Marker 73.6 (cM) Automated name-based View Maps
Cotton - PK - c1 BNL2921 Marker 100 (cM) Automated name-based View Maps
Cotton - TH - 1 BNL2921 Marker 72.7 (cM) Automated name-based View Maps
Cotton - GVc - 1 BNL2921 Marker 39 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c1 BNL2921 Marker 115.3 (cM) Automated name-based View Maps
Cotton - E3 - 1 BNL2921 Marker 39.1 (cM) Automated name-based View Maps
BNL3085 Marker Cotton 15,884,083 - 15,884,732 Cotton - CH - 15 BNL3085 Marker 103.4 (cM) Automated name-based View Maps
Cotton - CH - 1 BNL3085 Marker 80.7 (cM) Automated name-based View Maps
BNL3345 Marker Cotton 3,880,412 - 3,880,703 Cotton - Guazuncho2xVH8-RIL - c15 BNL3345 Marker 65.27 (cM) Automated name-based View Maps
Cotton - PK - c15 BNL3345 Marker 102.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 BNL3345 Marker 152.7 (cM) Automated name-based View Maps
Cotton - GVc - 15 BNL3345 Marker 109.3 (cM) Automated name-based View Maps