CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Graimondii_physical
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Gr_Chr09
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr09
Map Start: 0 bp
Map Stop: 70,494,708 bp
Features by Type:
419 Marker Cotton
419 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 419.       of 17 | Next
Cotton - Graimondii_physical - Gr_Chr09
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1135 Marker Cotton 2,240,465 - 2,241,338 Cotton - GVc - 5 A1135 Marker 30 (cM) Automated name-based View Maps
Cotton - PK - c5 A1135 Marker 10.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 A1135 Marker 31.3 (cM) Automated name-based View Maps
Cotton - PK - c7 A1135 Marker 218.4 (cM) Automated name-based View Maps
A1153 Marker Cotton 17,858,892 - 17,859,454 Cotton - PK - c5 A1153 Marker 104.4 (cM) Automated name-based View Maps
A1246 Marker Cotton 9,303,772 - 9,304,828 Cotton - PK - c5 A1246 Marker 60.7 (cM) Automated name-based View Maps
A1318 Marker Cotton 12,475,616 - 12,477,351 Cotton - PK - c5 A1318 Marker 68.7 (cM) Automated name-based View Maps
Cotton - PK - D08 A1318 Marker 99 (cM) Automated name-based View Maps
A1378 Marker Cotton 20,859,898 - 20,860,959 Cotton - PK - D08 A1378 Marker 136.7 (cM) Automated name-based View Maps
A1429 Marker Cotton 44,076,834 - 44,077,425 Cotton - GVc - 16 A1429 Marker 73.9 (cM) Automated name-based View Maps
Cotton - PK - D08 A1429 Marker 183.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c16 A1429 Marker 139.8 (cM) Automated name-based View Maps
A1432 Marker Cotton 29,588,361 - 29,589,502 Cotton - PK - D08 A1432 Marker 177.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 A1432 Marker 174.3 (cM) Automated name-based View Maps
Cotton - GVc - 19 A1432 Marker 133.8 (cM) Automated name-based View Maps
A1543 Marker Cotton 47,355,415 - 47,356,313 Cotton - PK - c4 A1543 Marker 107.2 (cM) Automated name-based View Maps
Cotton - PK - c4 A1543 Marker 108.9 (cM) Automated name-based View Maps
A1739 Marker Cotton 19,179,951 - 19,180,880 Cotton - PK - c5 A1739 Marker 111.6 (cM) Automated name-based View Maps
BNL0285 Marker Cotton 9,990,692 - 9,990,993 Cotton - E3 - 19 BNL0285 Marker 80.5 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL0285 Marker 146.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL0285 Marker 62.9 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL0285 Marker 59.1 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL0285 Marker 56.07 (cM) Automated name-based View Maps
Cotton - PK - A01 BNL0285 Marker 51.5 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL0285 Marker 86.4 (cM) Automated name-based View Maps
BNL0390 Marker Cotton 20,214,083 - 20,214,372 Cotton - TH - 19 BNL0390 Marker 105.6 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL0390 Marker 100.5 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL0390 Marker 141.1 (cM) Automated name-based View Maps
BNL0542 Marker Cotton 24,289,365 - 24,289,705 Cotton - GVc - 5 BNL0542 Marker 58.7 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL0542 Marker 120.9 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL0542 Marker 101.65 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL0542 Marker 105.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL0542 Marker 50.68 (cM) Automated name-based View Maps
BNL0852 Marker Cotton 12,109,201 - 12,109,514 Cotton - GVc - 5 BNL0852 Marker 68.1 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL0852 Marker 98.6 (cM) Automated name-based View Maps
Cotton - PK - c18 BNL0852 Marker 48.9 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL0852 Marker 95.9 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL0852 Marker 74.1 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL0852 Marker 132.1 (cM) Automated name-based View Maps
Cotton - T3 - 19 BNL0852 Marker 73.8 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL0852 Marker 93.2 (cM) Automated name-based View Maps
Cotton - PK - A01 BNL0852 Marker 100.9 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL0852 Marker 65.2 (cM) Automated name-based View Maps
BNL1690 Marker Cotton 8,528,106 - 8,528,298 Cotton - CH - 19 BNL1690 Marker 156.3 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL1690 Marker 73.3 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL1690 Marker 48.3 (cM) Automated name-based View Maps
Cotton - GVc - 19 BNL1690 Marker 61.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL1690 Marker 80.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c19 BNL1690 Marker 22.42 (cM) Automated name-based View Maps
BNL3089 Marker Cotton 69,826,068 - 69,826,391 Cotton - E3 - 4 BNL3089 Marker 137.3 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL3089 Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 4 BNL3089 Marker 13.66 (cM) Automated name-based View Maps
BNL3348 Marker Cotton 27,389,458 - 27,390,029 Cotton - T3 - 19 BNL3348 Marker 115.91 (cM) Automated name-based View Maps
BNL3492 Marker Cotton 10,169,479 - 10,170,045 Cotton - E3 - 5 BNL3492 Marker 99.6 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL3492 Marker 82.5 (cM) Automated name-based View Maps
BNL3535 Marker Cotton 51,078,924 - 51,079,433 Cotton - GVc - 19 BNL3535 Marker 158.3 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL3535 Marker 196 (cM) Automated name-based View Maps
Cotton - CH - 19 BNL3535 Marker 23.6 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL3535 Marker 141.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D08 BNL3535 Marker 205.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - D08 BNL3535 Marker 132.2 (cM) Automated name-based View Maps
BNL3849 Marker Cotton 57,150,636 - 57,151,147 Cotton - CH - 22 BNL3849 Marker 73.1 (cM) Automated name-based View Maps
BNL3903 Marker Cotton 15,102,676 - 15,103,244 Cotton - PK - c23 BNL3903 Marker 68.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL3903 Marker 105.2 (cM) Automated name-based View Maps
Cotton - PK - c25 BNL3903 Marker 86.3 (cM) Automated name-based View Maps
Cotton - TH - 19 BNL3903 Marker 76.4 (cM) Automated name-based View Maps
Cotton - PK - D08 BNL3903 Marker 99.9 (cM) Automated name-based View Maps
BNL3992 Marker Cotton 21,481,240 - 21,481,867 Cotton - GVc - 5 BNL3992 Marker 47.3 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL3992 Marker 104.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3992 Marker 167.7 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL3992 Marker 123.4 (cM) Automated name-based View Maps
Cotton - E3 - 5 BNL3992 Marker 153.3 (cM) Automated name-based View Maps
Cotton - PK - c5 BNL3992 Marker 117.3 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3992 Marker 90.08 (cM) Automated name-based View Maps
BNL3994 Marker Cotton 62,969,477 - 62,970,033 Cotton - GVc - 22 BNL3994 Marker 53.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL3994 Marker 79.2 (cM) Automated name-based View Maps
Cotton - TH - 26 BNL3994 Marker 111.1 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL3994 Marker 62.5 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL3994 Marker 56.39 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL3994 Marker 87.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL3994 Marker 104.6 (cM) Automated name-based View Maps
BNL4047 Marker Cotton 48,435,195 - 48,435,679 Cotton - Guazuncho2xVH8-RIL - c4 BNL4047 Marker 39.98 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL4047 Marker 44.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL4047 Marker 109.2 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL4047 Marker 44 (cM) Automated name-based View Maps
Cotton - CH - 4 BNL4047 Marker 62.5 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL4047 Marker 90.8 (cM) Automated name-based View Maps
BNL4069 Marker Cotton 34,280,056 - 34,280,453 Cotton - CH - 19 BNL4069 Marker 36.8 (cM) Automated name-based View Maps
BNL4071 Marker Cotton 7,131,232 - 7,131,564 Cotton - T3 - 19 BNL4071 Marker 44.66 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4071 Marker 184.2 (cM) Automated name-based View Maps
Cotton - E3 - 19 BNL4071 Marker 69.3 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL4071 Marker 43.34 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4071a Marker 17.65 (cM) Automated name-based View Maps