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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr12
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr12
Map Start: 0 bp
Map Stop: 35,241,295 bp
Features by Type:
190 Marker Cotton
190 Total

Map Features

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Items 1 to 25 of 190.       of 8 | Next
Cotton - Graimondii_physical - Gr_Chr12
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1159 Marker Cotton 9,664,111 - 9,665,819 Cotton - PK - c5 A1159 Marker 152.2 (cM) Automated name-based View Maps
Cotton - PK - c5 A1159 Marker 150.9 (cM) Automated name-based View Maps
A1172 Marker Cotton 27,208,472 - 27,209,175 Cotton - Guazuncho2xVH8-BC1 - c4 A1172 Marker 74 (cM) Automated name-based View Maps
Cotton - GVc - 4 A1172 Marker 29.6 (cM) Automated name-based View Maps
Cotton - PK - c4 A1172 Marker 92.9 (cM) Automated name-based View Maps
A1184 Marker Cotton 30,523,282 - 30,523,823 Cotton - PK - c22 A1184 Marker 27.3 (cM) Automated name-based View Maps
A1459 Marker Cotton 12,937,188 - 12,937,898 Cotton - PK - c5 A1459 Marker 155.7 (cM) Automated name-based View Maps
Cotton - PK - c22 A1459 Marker 46.7 (cM) Automated name-based View Maps
A1483 Marker Cotton 13,306,824 - 13,307,580 Cotton - PK - c5 A1483 Marker 155.7 (cM) Automated name-based View Maps
A1535 Marker Cotton 12,827,598 - 12,828,720 Cotton - Guazuncho2xVH8-BC1 - c5 A1535 Marker 255.8 (cM) Automated name-based View Maps
Cotton - GVc - 5 A1535 Marker 93 (cM) Automated name-based View Maps
Cotton - PK - c22 A1535 Marker 46.7 (cM) Automated name-based View Maps
Cotton - GVc - 22 A1535 Marker 60.1 (cM) Automated name-based View Maps
Cotton - PK - c5 A1535 Marker 155.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 A1535 Marker 91.3 (cM) Automated name-based View Maps
A1618 Marker Cotton 6,101,823 - 6,102,316 Cotton - PK - c22 A1618 Marker 57.9 (cM) Automated name-based View Maps
BNL0137 Marker Cotton 19,650,017 - 19,650,335 Cotton - E3 - 13 BNL0137 Marker 166.1 (cM) Automated name-based View Maps
Cotton - CH - 21 BNL0137 Marker 104.4 (cM) Automated name-based View Maps
BNL0358 Marker Cotton 30,805,743 - 30,806,061 Cotton - E3 - 22 BNL0358 Marker 71 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL0358 Marker 28.6 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0358 Marker 43.3 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL0358 Marker 66.4 (cM) Automated name-based View Maps
BNL0448 Marker Cotton 4,549,496 - 4,549,873 Cotton - CH - 22 BNL0448 Marker 110.4 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL0448 Marker 17.59 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL0448 Marker 22.6 (cM) Automated name-based View Maps
BNL0530 Marker Cotton 28,958,470 - 28,958,747 Cotton - T3 - 4 BNL0530 Marker 61.45 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL0530 Marker 50.1 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL0530 Marker 68.8 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL0530 Marker 30.7 (cM) Automated name-based View Maps
Cotton - E3 - 4 BNL0530 Marker 72.3 (cM) Automated name-based View Maps
BNL2572 Marker Cotton 32,796,523 - 32,796,809 Cotton - Guazuncho2xVH8-RIL - c4 BNL2572 Marker 8.87 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c4 BNL2572 Marker 0 (cM) Automated name-based View Maps
Cotton - GVc - 4 BNL2572 Marker 12.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 BNL2572 Marker 52.5 (cM) Automated name-based View Maps
Cotton - TH - 4 BNL2572 Marker 95.2 (cM) Automated name-based View Maps
Cotton - CH - 4 BNL2572 Marker 32.6 (cM) Automated name-based View Maps
Cotton - T3 - 4 BNL2572 Marker 82.71 (cM) Automated name-based View Maps
BNL3873 Marker Cotton 34,581,981 - 34,582,520 Cotton - GVc - 22 BNL3873 Marker 0.4 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL3873 Marker 103.58 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL3873 Marker 4.17 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL3873 Marker 7.5 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL3873 Marker 29.7 (cM) Automated name-based View Maps
BNL3881 Marker Cotton 19,553,009 - 19,553,432 Cotton - E3 - 22 BNL3881 Marker 87.7 (cM) Automated name-based View Maps
BNL3945 Marker Cotton 5,867,282 - 5,867,705 Cotton - E3 - 22 BNL3945 Marker 114.1 (cM) Automated name-based View Maps
BNL3995 Marker Cotton 15,134,435 - 15,134,833 Cotton - GVc - 5 BNL3995 Marker 95.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL3995 Marker 78.74 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL3995 Marker 130.17 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 BNL3995 Marker 258.5 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL3995 Marker 74.2 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL3995 Marker 151.3 (cM) Automated name-based View Maps
BNL4015 Marker Cotton 14,772,259 - 14,772,775 Cotton - E3 - 22 BNL4015 Marker 87.4 (cM) Automated name-based View Maps
BNL4030 Marker Cotton 5,740,007 - 5,740,438 Cotton - TH - 22 BNL4030 Marker 11.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c22 BNL4030 Marker 79 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 BNL4030 Marker 130.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 BNL4030b Marker 92.78 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 124.9 (cM) Automated name-based View Maps
Cotton - TH - 5 BNL4030 Marker 170.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 BNL4030a Marker 66.94 (cM) Automated name-based View Maps
Cotton - T3 - 22 BNL4030 Marker 27.12 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4030 Marker 81.5 (cM) Automated name-based View Maps
Cotton - T3 - 5 BNL4030 Marker 156.51 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c5 BNL4030 Marker 109 (cM) Automated name-based View Maps
Cotton - GVc - 5 BNL4030 Marker 114.3 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4030 Marker 57.5 (cM) Automated name-based View Maps
Cotton - CH - 5 BNL4030 Marker 58.8 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4030 Marker 103.4 (cM) Automated name-based View Maps
BNL4092 Marker Cotton 5,689,884 - 5,690,385 Cotton - Guazuncho2xVH8-RIL - c22 BNL4092 Marker 65.95 (cM) Automated name-based View Maps
Cotton - GVc - 22 BNL4092 Marker 79.4 (cM) Automated name-based View Maps
Cotton - CH - 22 BNL4092 Marker 141 (cM) Automated name-based View Maps
Cotton - TH - 22 BNL4092 Marker 34 (cM) Automated name-based View Maps
Cotton - E3 - 22 BNL4092 Marker 114.9 (cM) Automated name-based View Maps
CIR036 Marker Cotton 30,348,202 - 30,348,409 Cotton - GVc - 22 CIR036 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR036 Marker 25.7 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR036 Marker 73.77 (cM) Automated name-based View Maps
Cotton - E3 - 22 CIR036 Marker 72.3 (cM) Automated name-based View Maps
CIR122 Marker Cotton 32,909,187 - 32,909,567 Cotton - GVc - 22 CIR122 Marker 13 (cM) Automated name-based View Maps
Cotton - CH - 4 CIR122 Marker 29.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR122a Marker 16.29 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 CIR122 Marker 52.5 (cM) Automated name-based View Maps
Cotton - CH - 21 CIR122 Marker 109.2 (cM) Automated name-based View Maps
Cotton - E3 - 4 CIR122 Marker 16.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR122b Marker 12.76 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR122 Marker 15 (cM) Automated name-based View Maps
Cotton - TH - 4 CIR122 Marker 98 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR122 Marker 0 (cM) Automated name-based View Maps
CIR183 Marker Cotton 29,761,833 - 29,762,132 Cotton - GVc - 22 CIR183 Marker 28.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c22 CIR183 Marker 25.7 (cM) Automated name-based View Maps
Cotton - CH - 22 CIR183 Marker 53.9 (cM) Automated name-based View Maps
CIR185 Marker Cotton 6,070,567 - 6,070,757 Cotton - E3 - 5 CIR185 Marker 176.8 (cM) Automated name-based View Maps
Cotton - T3 - 5 CIR185 Marker 153.79 (cM) Automated name-based View Maps
Cotton - CH - 5 CIR185 Marker 61.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c5 CIR185 Marker 290.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c5 CIR185 Marker 92.05 (cM) Automated name-based View Maps
Cotton - GVc - 5 CIR185 Marker 113.6 (cM) Automated name-based View Maps
CIR200 Marker Cotton 19,367,796 - 19,368,110 Cotton - Guazuncho2xVH8-BC1 - c23 CIR200 Marker 145.5 (cM) Automated name-based View Maps
Cotton - GVc - 23 CIR200 Marker 77.7 (cM) Automated name-based View Maps
CIR218 Marker Cotton 35,241,043 - 35,241,295 Cotton - CH - 4 CIR218 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c4 CIR218a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c4 CIR218 Marker 35.8 (cM) Automated name-based View Maps
Cotton - CH - 22 CIR218 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c22 CIR218b Marker 0 (cM) Automated name-based View Maps
Cotton - T3 - 22 CIR218 Marker 106.92 (cM) Automated name-based View Maps
Cotton - GVc - 22 CIR218 Marker 3.9 (cM) Automated name-based View Maps
Cotton - GVc - 4 CIR218 Marker 0 (cM) Automated name-based View Maps