CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Cotton-Guazuncho2xVH8-BC1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps c16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Cotton - Guazuncho2xVH8-BC1 [ View Map Set Info ]
Map Name: c16
Map Start: 0 cM
Map Stop: 234.1 cM
Features by Type:
29 Marker
5 QTL
34 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 34.       of 2 | Next
Cotton - Guazuncho2xVH8-BC1 - c16
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E3M6_295 Marker 234.1 Cotton - HDC - 16 E3M6_295 Marker 139.6 (cM) Automated name-based View Maps
Cotton - GVc - 16 E3M6_295 Marker 142 (cM) Automated name-based View Maps
E3M4_370 Marker 203.9 Cotton - GVc - 16 E3M4_370 Marker 121.2 (cM) Automated name-based View Maps
Cotton - HDC - 16 E3M4_370 Marker 118.8 (cM) Automated name-based View Maps
Cotton - GVc - 16 E3M4_370 Marker 118.5 (cM) Automated name-based View Maps
E2M6_85 Marker 196.1 Cotton - HDC - 16 E2M6_85 Marker 114 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 E2M6_85 Marker 82 (cM) Automated name-based View Maps
Cotton - GVc - 16 E2M6_85 Marker 116.4 (cM) Automated name-based View Maps
G1158 Marker 189.6 Cotton - GVc - 16 G1158 Marker 110.5 (cM) Automated name-based View Maps
Cotton - PK - c16 G1158 Marker 125.3 (cM) Automated name-based View Maps
Cotton - HDC - 16 G1158 Marker 108.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 G1158 Marker Cotton 2,812,961 - 2,813,502 (bp) Automated name-based View Maps
Cotton - PK - c7 G1158 Marker 196.9 (cM) Automated name-based View Maps
Cotton - HDC - 7 G1158 Marker 131.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 G1158 Marker 205 (cM) Automated name-based View Maps
Cotton - GVc - 7 G1158 Marker 106.3 (cM) Automated name-based View Maps
CG02 Marker 183.8 Cotton - HDC - 16 CG02 Marker 103.6 (cM) Automated name-based View Maps
Cotton - GVc - 16 CG02 Marker 106 (cM) Automated name-based View Maps
JESPR292 Marker 181.8 Cotton - CH - 16 JESPR292 Marker 57.5 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR292 Marker 36 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR292 Marker 103.3 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR292 Marker 45.5 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR292 Marker 23.01 (cM) Automated name-based View Maps
Cotton - HDC - 16 JESPR292 Marker 100.9 (cM) Automated name-based View Maps
A1429 Marker 139.8 Cotton - HDC - 16 A1429 Marker 72.2 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr09 A1429 Marker Cotton 44,076,834 - 44,077,425 (bp) Automated name-based View Maps
Cotton - PK - D08 A1429 Marker 183.2 (cM) Automated name-based View Maps
Cotton - HDC - 19 A1429 Marker 57.2 (cM) Automated name-based View Maps
Cotton - GVc - 16 A1429 Marker 73.9 (cM) Automated name-based View Maps
E4M2_129 Marker 135.5 Cotton - HDC - 16 E4M2_129 Marker 84.6 (cM) Automated name-based View Maps
Cotton - GVc - 16 E4M2_129 Marker 87.8 (cM) Automated name-based View Maps
NAU751 Marker 130 No other positions
E4M6_312 Marker 130 Cotton - HDC - 16 E4M6_312 Marker 79.7 (cM) Automated name-based View Maps
Cotton - GVc - 16 E4M6_312 Marker 82.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 E4M6_312 Marker 56.4 (cM) Automated name-based View Maps
BNL3008 Marker 127.5 Cotton - T3 - 16 BNL3008 Marker 49.75 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL3008 Marker 74.4 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL3008 Marker 63.2 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL3008 Marker 78.6 (cM) Automated name-based View Maps
Cotton - PK - c16 BNL3008 Marker 81.5 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL3008 Marker 69 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL3008 Marker 79.7 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL3008 Marker Cotton 12,327,665 - 12,327,992 (bp) Automated name-based View Maps
A1182 Marker 127.5 Cotton - Guazuncho2xVH8-BC1 - c7 A1182 Marker 157.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 A1182 Marker 76 (cM) Automated name-based View Maps
Cotton - PK - c3 A1182 Marker 52.3 (cM) Automated name-based View Maps
Cotton - HDC - 3 A1182 Marker 101.3 (cM) Automated name-based View Maps
Cotton - PK - c16 A1182 Marker 82.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 A1182 Marker 100.9 (cM) Automated name-based View Maps
Cotton - PK - c7 A1182 Marker 157.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 A1182 Marker Cotton 12,310,138 - 12,311,167 (bp) Automated name-based View Maps
Cotton - GVc - 16 A1182 Marker 78.6 (cM) Automated name-based View Maps
Cotton - GVc - 7 A1182 Marker 72.8 (cM) Automated name-based View Maps
JESPR102 Marker 127.5 Cotton - GVc - 16 JESPR102 Marker 78 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR102 Marker 74.4 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR102 Marker 63.8 (cM) Automated name-based View Maps
Cotton - CH - 16 JESPR102 Marker 75.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 75.7 (cM) Automated name-based View Maps
Cotton - GVc - 15 JESPR102 Marker 67.3 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c15 JESPR102 Marker 101.2 (cM) Automated name-based View Maps
Cotton - T3 - 16 JESPR102 Marker 47.06 (cM) Automated name-based View Maps
Cotton - HDC - 16 CLU303 Marker 61.4 (cM) Automated name-based View Maps
Cotton - HDC - 15 CLU303 Marker 80.2 (cM) Automated name-based View Maps
E3M4_115 Marker 127.5 Cotton - GVc - 16 E3M4_115 Marker 76.4 (cM) Automated name-based View Maps
Cotton - HDC - 16 E3M4_115 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 E3M4_115 Marker 50.4 (cM) Automated name-based View Maps
BNL2986 Marker 119.4 Cotton - E3 - 16 BNL2986 Marker 57.9 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL2986 Marker 58.37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 BNL2986 Marker 46.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 BNL2986 Marker 30.82 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL2986 Marker 67.8 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 BNL2986 Marker Cotton 15,952,145 - 15,952,543 (bp) Automated name-based View Maps
Cotton - HDC - 16 BNL2986 Marker 70.4 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL2986 Marker 71.8 (cM) Automated name-based View Maps
Cotton - CH - 16 BNL2986 Marker 54.1 (cM) Automated name-based View Maps
JESPR128 Marker 112.7 Cotton - HDC - 16 JESPR128 Marker 61.5 (cM) Automated name-based View Maps
Cotton - TH - 16 JESPR128 Marker 71.7 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR128 Marker 64.2 (cM) Automated name-based View Maps
Cotton - E3 - 16 JESPR128 Marker 86.5 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR128 Marker Cotton 17,714,732 - 17,715,061 (bp) Automated name-based View Maps
Cotton - CH - 16 JESPR128 Marker 42.5 (cM) Automated name-based View Maps
E7M6_97 Marker 108.7 Cotton - HDC - 16 E7M6_97 Marker 57 (cM) Automated name-based View Maps
Cotton - GVc - 16 E7M6_97 Marker 59.8 (cM) Automated name-based View Maps
E5M1_140 Marker 108.7 Cotton - GVc - 16 E5M1_140 Marker 54.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 E5M1_140 Marker 39.7 (cM) Automated name-based View Maps
Cotton - HDC - 16 E5M1_140 Marker 52.5 (cM) Automated name-based View Maps
E3M5_170 Marker 108.7 Cotton - Guazuncho2xVH8-BC2 - c16 E3M5_170 Marker 35.9 (cM) Automated name-based View Maps
Cotton - HDC - 16 E3M5_170 Marker 57.9 (cM) Automated name-based View Maps
Cotton - GVc - 16 E3M5_170 Marker 60.6 (cM) Automated name-based View Maps
JESPR228 Marker 100.8 Cotton - HDC - 16 JESPR228 Marker 54.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 JESPR228 Marker 67.6 (cM) Automated name-based View Maps
Cotton - GVc - 16 JESPR228 Marker 57.5 (cM) Automated name-based View Maps
Cotton - TH - 7 JESPR228 Marker 58.1 (cM) Automated name-based View Maps
Cotton - Graimondii_physical - Gr_Chr01 JESPR228 Marker Cotton 24,530,390 - 24,530,827 (bp) Automated name-based View Maps
Cotton - T3 - 16 JESPR228 Marker 76.37 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 JESPR228 Marker 86.8 (cM) Automated name-based View Maps
Cotton - GVc - 7 JESPR228 Marker 37.5 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c7 JESPR228b Marker 19.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 JESPR228a Marker 21.24 (cM) Automated name-based View Maps
Cotton - T3 - 7 JESPR228 Marker 86.06 (cM) Automated name-based View Maps
At55 Marker 72.8 Cotton - HDC - 16 At55 Marker 39.5 (cM) Automated name-based View Maps
Cotton - GVc - 16 At55 Marker 40 (cM) Automated name-based View Maps
BNL1604 Marker 69.6 Cotton - GVc - 7 BNL1604 Marker 28.6 (cM) Automated name-based View Maps
Cotton - HDC - 7 BNL1604 Marker 60.3 (cM) Automated name-based View Maps
Cotton - CH - 7 BNL1604 Marker 60 (cM) Automated name-based View Maps
Cotton - E3 - 16 BNL1604 Marker 117.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c16 BNL1604 Marker 11.2 (cM) Automated name-based View Maps
Cotton - TH - 7 BNL1604 Marker 74.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c7 BNL1604 Marker 70.2 (cM) Automated name-based View Maps
Cotton - TH - 16 BNL1604 Marker 93.8 (cM) Automated name-based View Maps
Cotton - GVc - 16 BNL1604 Marker 35.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c7 BNL1604 Marker 10.6 (cM) Automated name-based View Maps
Cotton - HDC - 16 BNL1604 Marker 35.6 (cM) Automated name-based View Maps
Cotton - T3 - 7 BNL1604 Marker 93.22 (cM) Automated name-based View Maps
Cotton - T3 - 16 BNL1604 Marker 92.75 (cM) Automated name-based View Maps
pAR544 Marker 56.5 Cotton - HDC - 16 pAR544 Marker 24 (cM) Automated name-based View Maps
Cotton - GVc - 16 pAR544 Marker 24 (cM) Automated name-based View Maps
Cotton - PK - c16 pAR544 Marker 24.8 (cM) Automated name-based View Maps
A1826 Marker 27.2 Cotton - GVc - 16 A1826 Marker 12.8 (cM) Automated name-based View Maps
Cotton - PK - c7 A1826 Marker 7.8 (cM) Automated name-based View Maps
Cotton - HDC - 16 A1826 Marker 12.8 (cM) Automated name-based View Maps
Cotton - HDC - 7 A1826 Marker 5.2 (cM) Automated name-based View Maps
NAU966 Marker 17.1 Cotton - GVc - 9 NAU0966 Marker 41.7 (cM) Automated name-based View Maps
Cotton - GVc - 16 NAU0966 Marker 30 (cM) Automated name-based View Maps
Cotton - HDC - 9 NAU0966 Marker 47.7 (cM) Automated name-based View Maps
Cotton - TH - 16 NAU0966 Marker 128 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c9 NAU0966b Marker 25.05 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c9 NAU966 Marker 44 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c16 NAU0966a Marker 0 (cM) Automated name-based View Maps
Cotton - HDC - 16 NAU0966 Marker 30 (cM) Automated name-based View Maps